Effects of sample size on the performance of species distribution models

被引:1924
作者
Wisz, M. S. [1 ]
Hijmans, R. J. [2 ]
Li, J. [3 ]
Peterson, A. T. [4 ,5 ]
Graham, C. H. [6 ]
Guisan, A. [7 ]
机构
[1] Univ Aarhus, Dept Arctic Environm, Natl Environm Res Inst, Roskilde, Denmark
[2] Int Rice Res Inst, Los Banos, Laguna, Philippines
[3] Dept Marine & Coastal Environm, Canberra, ACT, Australia
[4] Univ Kansas, Museum Nat Hist, Lawrence, KS 66045 USA
[5] Univ Kansas, Biodivers Res Ctr, Lawrence, KS 66045 USA
[6] SUNY Stony Brook, Dept Ecol & Evolut, Stony Brook, NY 11794 USA
[7] Univ Lausanne, Dept Ecol & Evolut, Lausanne, Switzerland
关键词
ecological niche model; MAXENT; model comparison; OM-GARP; sample size; species distribution model;
D O I
10.1111/j.1472-4642.2008.00482.x
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
A wide range of modelling algorithms is used by ecologists, conservation practitioners, and others to predict species ranges from point locality data. Unfortunately, the amount of data available is limited for many taxa and regions, making it essential to quantify the sensitivity of these algorithms to sample size. This is the first study to address this need by rigorously evaluating a broad suite of algorithms with independent presence-absence data from multiple species and regions. We evaluated predictions from 12 algorithms for 46 species (from six different regions of the world) at three sample sizes (100, 30, and 10 records). We used data from natural history collections to run the models, and evaluated the quality of model predictions with area under the receiver operating characteristic curve (AUC). With decreasing sample size, model accuracy decreased and variability increased across species and between models. Novel modelling methods that incorporate both interactions between predictor variables and complex response shapes (i.e. GBM, MARS-INT, BRUTO) performed better than most methods at large sample sizes but not at the smallest sample sizes. Other algorithms were much less sensitive to sample size, including an algorithm based on maximum entropy (MAXENT) that had among the best predictive power across all sample sizes. Relative to other algorithms, a distance metric algorithm (DOMAIN) and a genetic algorithm (OM-GARP) had intermediate performance at the largest sample size and among the best performance at the lowest sample size. No algorithm predicted consistently well with small sample size (n < 30) and this should encourage highly conservative use of predictions based on small sample size and restrict their use to exploratory modelling.
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页码:763 / 773
页数:11
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