共 77 条
Systems biology of transcription control in macrophages
被引:23
作者:

Ravasi, Timothy
论文数: 0 引用数: 0
h-index: 0
机构: Univ Edinburgh, Roslin Inst, Roslin EH25 9PS, Midlothian, Scotland

Wells, Christine A.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Edinburgh, Roslin Inst, Roslin EH25 9PS, Midlothian, Scotland

Hume, David A.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Edinburgh, Roslin Inst, Roslin EH25 9PS, Midlothian, Scotland Univ Edinburgh, Roslin Inst, Roslin EH25 9PS, Midlothian, Scotland
机构:
[1] Univ Edinburgh, Roslin Inst, Roslin EH25 9PS, Midlothian, Scotland
[2] Univ Calif San Diego, Jacobs Sch Engn, Dept Bioengn, La Jolla, CA 92093 USA
[3] Univ Calif San Diego, Scripps NeuroAIDS Preclin Studies Ctr, La Jolla, CA 92093 USA
[4] Griffith Univ, Eskitis Inst Cell & Mol Therapies, Nathan, Qld 4111, Australia
来源:
关键词:
D O I:
10.1002/bies.20683
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
The study of the mammalian immune system offers many advantages to systems biologists. The cellular components of the mammalian immune system are experimentally tractable; they can be isolated or differentiated from in vivo and ex vivo sources and have an essential role in health and disease. For these reasons, the major effectors cells of the innate immune system, macrophages, have been a particular focus in international genome and transcriptome consortia. Genome-scale analysis of the transcriptome, and transcription initiation has enabled the construction of predictive models of transcription control in macrophages that identify the points of control (the major nodes of networks) and the ways in which they interact.
引用
收藏
页码:1215 / 1226
页数:12
相关论文
共 77 条
[71]
Systematic interactome mapping and genetic perturbation analysis of a C-elegans TGF-β signaling network
[J].
Tewari, M
;
Hu, PJ
;
Ahn, JS
;
Ayivi-Guedehoussou, N
;
Vidalain, PO
;
Li, SM
;
Milstein, S
;
Armstrong, CM
;
Boxem, M
;
Butler, MD
;
Busiguina, S
;
Rual, JF
;
Ibarrola, N
;
Chaklos, ST
;
Bertin, N
;
Vaglio, P
;
Edgley, ML
;
King, KV
;
Albert, PS
;
Vandenhaute, J
;
Pandey, A
;
Riddle, DL
;
Ruvkun, G
;
Vidal, M
.
MOLECULAR CELL,
2004, 13 (04)
:469-482

Tewari, M
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Hu, PJ
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Ahn, JS
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Ayivi-Guedehoussou, N
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Vidalain, PO
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Li, SM
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Milstein, S
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Armstrong, CM
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Boxem, M
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Butler, MD
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Busiguina, S
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Rual, JF
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Ibarrola, N
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Chaklos, ST
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Bertin, N
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Vaglio, P
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Edgley, ML
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

King, KV
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Albert, PS
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Vandenhaute, J
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Pandey, A
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Riddle, DL
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Ruvkun, G
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA

Vidal, M
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA Harvard Univ, Sch Med, Ctr Canc Syst Biol, Boston, MA 02115 USA
[72]
Toll-like receptors: key mediators of microbe detection
[J].
Underhill, DM
;
Ozinsky, A
.
CURRENT OPINION IN IMMUNOLOGY,
2002, 14 (01)
:103-110

Underhill, DM
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Syst Biol, Seattle, WA 98105 USA Inst Syst Biol, Seattle, WA 98105 USA

Ozinsky, A
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Syst Biol, Seattle, WA 98105 USA Inst Syst Biol, Seattle, WA 98105 USA
[73]
Regulation of gene expression:: probing DNA-protein interactions in vivo and in vitro
[J].
Vigneault, Francois
;
Guerin, Sylvain L.
.
EXPERT REVIEW OF PROTEOMICS,
2005, 2 (05)
:705-718

Vigneault, Francois
论文数: 0 引用数: 0
h-index: 0
机构:
CHU Laval, CHUQ, Ctr Rech, Lab Endocrinol Mol & Oncol, Quebec City, PQ G1V 4G2, Canada CHU Laval, CHUQ, Ctr Rech, Lab Endocrinol Mol & Oncol, Quebec City, PQ G1V 4G2, Canada

Guerin, Sylvain L.
论文数: 0 引用数: 0
h-index: 0
机构:
CHU Laval, CHUQ, Ctr Rech, Lab Endocrinol Mol & Oncol, Quebec City, PQ G1V 4G2, Canada CHU Laval, CHUQ, Ctr Rech, Lab Endocrinol Mol & Oncol, Quebec City, PQ G1V 4G2, Canada
[74]
Alternate transcription of the Toll-like receptor signaling cascade
[J].
Wells, CA
;
Chalk, AM
;
Forrest, A
;
Taylor, D
;
Waddell, N
;
Schroder, K
;
Himes, SR
;
Faulkner, G
;
Lo, S
;
Kasukawa, T
;
Kawaji, H
;
Kai, C
;
Kawai, J
;
Katayama, S
;
Carninci, P
;
Hayashizaki, Y
;
Hume, DA
;
Grimmond, SM
.
GENOME BIOLOGY,
2006, 7 (02)

Wells, CA
论文数: 0 引用数: 0
h-index: 0
机构:
Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Chalk, AM
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Forrest, A
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Taylor, D
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Waddell, N
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Schroder, K
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Himes, SR
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Faulkner, G
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Lo, S
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Kasukawa, T
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Kawaji, H
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Kai, C
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Kawai, J
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Katayama, S
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Carninci, P
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Hayashizaki, Y
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Hume, DA
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia

Grimmond, SM
论文数: 0 引用数: 0
h-index: 0
机构: Griffith Univ, Sch Biol & Biomed Sci, Eskitis Inst Cell & Mol Therapies, Brisbane, Qld 4111, Australia
[75]
Inflammation suppressor genes: please switch out all the lights
[J].
Wells, CA
;
Ravasi, T
;
Hume, DA
.
JOURNAL OF LEUKOCYTE BIOLOGY,
2005, 78 (01)
:9-13

Wells, CA
论文数: 0 引用数: 0
h-index: 0
机构: Univ Queensland, IMB, CRC Chron Inflammatory Dis, St Lucia, Qld 4072, Australia

Ravasi, T
论文数: 0 引用数: 0
h-index: 0
机构: Univ Queensland, IMB, CRC Chron Inflammatory Dis, St Lucia, Qld 4072, Australia

Hume, DA
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Queensland, IMB, CRC Chron Inflammatory Dis, St Lucia, Qld 4072, Australia Univ Queensland, IMB, CRC Chron Inflammatory Dis, St Lucia, Qld 4072, Australia
[76]
Continued discovery of transcriptional units expressed in cells of the mouse mononuclear phagocyte lineage
[J].
Wells, CA
;
Ravasi, T
;
Sultana, R
;
Yagi, K
;
Carninci, P
;
Bono, H
;
Faulkner, G
;
Okazaki, Y
;
Quackenbush, J
;
Hume, DA
;
Lyons, PA
.
GENOME RESEARCH,
2003, 13 (6B)
:1360-1365

Wells, CA
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England

Ravasi, T
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England

Sultana, R
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England

Yagi, K
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England

Carninci, P
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England

Bono, H
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England

Faulkner, G
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England

Okazaki, Y
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England

Quackenbush, J
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England

Hume, DA
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England

Lyons, PA
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England Univ Cambridge, Inst Med Res, JDRF WT Diabet & Inflammat Lab, Cambridge CB2 2XY, England
[77]
Genetic control of the innate immune response
[J].
Christine A Wells
;
Timothy Ravasi
;
Geoffrey J Faulkner
;
Piero Carninci
;
Yasushi Okazaki
;
Yoshihide Hayashizaki
;
Matthew Sweet
;
Brandon J Wainwright
;
David A Hume
.
BMC Immunology,
4 (1)

Christine A Wells
论文数: 0 引用数: 0
h-index: 0
机构: Institute for Molecular Biosciences, The University of Queensland, Brisbane

Timothy Ravasi
论文数: 0 引用数: 0
h-index: 0
机构: Institute for Molecular Biosciences, The University of Queensland, Brisbane

Geoffrey J Faulkner
论文数: 0 引用数: 0
h-index: 0
机构: Institute for Molecular Biosciences, The University of Queensland, Brisbane

Piero Carninci
论文数: 0 引用数: 0
h-index: 0
机构: Institute for Molecular Biosciences, The University of Queensland, Brisbane

Yasushi Okazaki
论文数: 0 引用数: 0
h-index: 0
机构: Institute for Molecular Biosciences, The University of Queensland, Brisbane

Yoshihide Hayashizaki
论文数: 0 引用数: 0
h-index: 0
机构: Institute for Molecular Biosciences, The University of Queensland, Brisbane

Matthew Sweet
论文数: 0 引用数: 0
h-index: 0
机构: Institute for Molecular Biosciences, The University of Queensland, Brisbane

Brandon J Wainwright
论文数: 0 引用数: 0
h-index: 0
机构: Institute for Molecular Biosciences, The University of Queensland, Brisbane

David A Hume
论文数: 0 引用数: 0
h-index: 0
机构: Institute for Molecular Biosciences, The University of Queensland, Brisbane