Planomicrobium koreense gen. nov., sp nov., a bacterium isolated from the Korean traditional fermented seafood jeotgal, and transfer of Planococcus okeanokoites (Nakagawa et al. 1996) and Planococcus mcmeekinii (Junge et al. 1998) to the genus Planomicrobium

被引:56
作者
Yoon, JH
Kang, SS
Lee, KC
Lee, ES
Kho, YH
Kang, KH
Park, YH
机构
[1] KRIBB, Taejon, South Korea
[2] Sungkyunkwan Univ, Dept Food & Life Sci, Jangan Gu, Suwon, South Korea
[3] Kyungsan Univ, Dept Preparatory Oriental Med, Kyungsan 712240, South Korea
关键词
genus Planococcus; genus Planomicrobium; Planomicrobium koreense sp nov; Planomicrobium okeanokoites comb. nov; Planomicrobium mcmeekinii comb. nov;
D O I
10.1099/00207713-51-4-1511
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A bacterial strain, JG07(T), isolated from the Korean traditional fermented seafood jeotgal, was subjected to a polyphasic taxonomic study. Cells of strain JG07(T) are cocci or short rods in the early growth phase but change to rods as the cultures age. The peptidoglycan type is A4 alpha, based on L-Lys-D-Glu. The menaquinone profile is characterized by the predominance of MK-8 followed by MK-7 and MK-6. The cellular fatty acid profile contains major amounts of saturated, unsaturated and branched fatty acids. The cellular phospholipids are phosphatidylethanolamine, phosphatidylglycerol and bisphosphatidylglycerol. The G+C content of the DNA is 47 mol%. Phylogenetic analysis showed that strain JG07(T) forms a cluster with Planococcus okeanokoites and Planococcus mcmeekinii, and the relationship between this cluster and two other Planococcus species described previously is supported by bootstrap analysis at a confidence level of 100%. The 16S-23S internally transcribed spacer (ITS) sequence similarity and DNA-DNA relatedness values between strain JG07(T) and the type strains of other Planococcus species are in the range 74.6-83.2% and 10.4-20.5%, respectively. On the basis of the phenotypic and phylogenetic data and the genomic distinctiveness, strain JG07(T) is considered to represent a new genus and a new species, for which the name Planomicrobium koreense gen. nov., sp. nov, is proposed. It is also proposed that Planococcus okeanokoites and Planococcus mcmeekinii be transferred to the new genus Planomicrobium as Planomicrobium okeanokoites and Planomicrobium mcmeekinii, respectively.
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页码:1511 / 1520
页数:10
相关论文
共 37 条
[1]   TRANSCRIPTIONAL ANALYSIS OF THE 16S RIBOSOMAL-RNA GENE OF THE RRND GENE SET OF STREPTOMYCES-COELICOLOR A3(2) [J].
BAYLIS, HA ;
BIBB, MJ .
MOLECULAR MICROBIOLOGY, 1988, 2 (05) :569-579
[2]   DNA BASE COMPOSITION AND TAXONOMY OF SOME MICROCOCCI [J].
BOHACEK, J ;
KOCUR, M ;
MARTINEC, T .
JOURNAL OF GENERAL MICROBIOLOGY, 1967, 46 :369-&
[3]  
Bozzola J.J. L.D. Russel., 1991, Electron microscopy: principles and techniques for biologists
[4]  
Cowan ST, 1974, Bacterial Characters and Characterization, V2nd
[5]   FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS [J].
EZAKI, T ;
HASHIMOTO, Y ;
YABUUCHI, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03) :224-229
[6]   PHYLOGENETIC INTERRELATIONSHIPS OF ROUND-SPORE-FORMING BACILLI CONTAINING CELL-WALLS BASED ON LYSINE AND THE NON-SPORE-FORMING GENERA CARYOPHANON, EXIGUOBACTERIUM, KURTHIA, AND PLANOCOCCUS [J].
FARROW, JAE ;
WALLBANKS, S ;
COLLINS, MD .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1994, 44 (01) :74-82
[7]  
FARROW JAE, 1992, FEMS MICROBIOL LETT, V93, P167
[8]  
Felsenstein J., 1993, PHYLIP PHYLOGENETIC
[9]   NUCLEOTIDE-SEQUENCE OF THE BACILLUS-SUBTILIS RIBOSOMAL-RNA OPERON, RRNB [J].
GREEN, CJ ;
STEWART, GC ;
HOLLIS, MA ;
VOLD, BS ;
BOTT, KF .
GENE, 1985, 37 (1-3) :261-266
[10]   A NEW SPECIES OF PLANOCOCCUS, PLANOCOCCUS-KOCURII ISOLATED FROM FISH, FROZEN FOODS, AND FISH CURING BRINE [J].
HAO, MV ;
KOMAGATA, K .
JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY, 1985, 31 (05) :441-455