Conformational Changes in DNA upon Ligand Binding Monitored by Circular Dichroism

被引:185
作者
Chang, Yu-Ming [2 ]
Chen, Cammy K. -M. [2 ]
Hou, Ming-Hon [1 ]
机构
[1] Natl Chung Hsing Univ, Inst Genom & Bioinformat, Taichung 402, Taiwan
[2] Acad Sinica, Inst Biol Chem, Taipei 115, Taiwan
关键词
DNA structure; circular dichroism; conformational changes; DNA-binding drugs; thermodynamic parameters; ANTITUMOR POLYAMINE ANALOGS; ACTINOMYCIN-D; BIOGENIC POLYAMINES; CRYSTAL-STRUCTURE; TRANSFER-RNA; SECONDARY-STRUCTURE; NEOMYCIN CONJUGATE; VACUUM-ULTRAVIOLET; CHROMOMYCIN A(3); NUCLEIC-ACIDS;
D O I
10.3390/ijms13033394
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
Circular dichroism (CD) spectroscopy is an optical technique that measures the difference in the absorption of left and right circularly polarized light. This technique has been widely employed in the studies of nucleic acids structures and the use of it to monitor conformational polymorphism of DNA has grown tremendously in the past few decades. DNA may undergo conformational changes to B-form, A-form, Z-form, quadruplexes, triplexes and other structures as a result of the binding process to different compounds. Here we review the recent CD spectroscopic studies of the induction of DNA conformational changes by different ligands, which includes metal derivative complex of aureolic family drugs, actinomycin D, neomycin, cisplatin, and polyamine. It is clear that CD spectroscopy is extremely sensitive and relatively inexpensive, as compared with other techniques. These studies show that CD spectroscopy is a powerful technique to monitor DNA conformational changes resulting from drug binding and also shows its potential to be a drug-screening platform in the future.
引用
收藏
页码:3394 / 3413
页数:20
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