Identification of fecal Escherichia coli from humans and animals by ribotyping

被引:131
作者
Carson, CA
Shear, BL
Ellersieck, MR
Asfaw, A
机构
[1] Univ Missouri, Dept Vet Pathobiol, Columbia, MO 65211 USA
[2] Univ Missouri, Agr Expt Stn, Columbia, MO 65211 USA
关键词
D O I
10.1128/AEM.67.4.1503-1507.2001
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Fecal pollution of water resources is an environmental problem of increasing importance. Identification of individual host sources of fecal Escherichia coli, such as humans, pets, production animals, and wild animals, is prerequisite to formulation of remediation plans. Ribotyping has been used to distinguish fecal E. coli of human origin from pooled fecal E. coli isolates of nonhuman origin. We have extended application of this technique to distinguishing fecal E. coli ribotype patterns from human and seven individual nonhuman hosts. Classification accuracy was best when the analysis was limited to three host sources. Application of this technique to identification of host sources of fecal coliforms in water could assist in formulation of pollution reduction plans.
引用
收藏
页码:1503 / 1507
页数:5
相关论文
共 20 条
[1]  
[Anonymous], SAS STAT US GUID VER
[2]   A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA [J].
Bernhard, AE ;
Field, KG .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (10) :4571-4574
[3]   Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources [J].
Dombek, PE ;
Johnson, LK ;
Zimmerley, ST ;
Sadowsky, MJ .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (06) :2572-2577
[4]   Marine waters contaminated with domestic sewage: Nonenteric illnesses associated with bather exposure in the United Kingdom [J].
Fleisher, JM ;
Kay, D ;
Salmon, RL ;
Jones, F ;
Wyer, MD ;
Godfree, AF .
AMERICAN JOURNAL OF PUBLIC HEALTH, 1996, 86 (09) :1228-1234
[5]  
GELDREICH EE, 1969, J WATER POLLUT CON F, V41, pR336
[6]  
Hagedorn C, 1999, APPL ENVIRON MICROB, V65, P5522
[7]   Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: Use in predicting the source of fecal contamination in subtropical waters [J].
Harwood, VJ ;
Whitlock, J ;
Withington, V .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (09) :3698-3704
[8]  
Johnson R. A., 1992, APPL MULTIVARIATE ST, V4
[9]  
Kariuki S, 1999, APPL ENVIRON MICROB, V65, P472
[10]  
Methods Standard, 1995, STANDARD METHODS EXA