Analysis of the Amborella trichopoda chloroplast genome sequence suggests that Amborella is not a basal angiosperm

被引：209

作者：

Goremykin, VV ^{[1
]}

Hirsch-Ernst, KI

Wölfl, S

Hellwig, FH

机构：

[1] Univ Jena, Inst Spezielle Bot, D-6900 Jena, Germany

[2] Univ Gottingen, Zentrum Pharmakkol & Toxikol, D-3400 Gottingen, Germany

[3] Univ Jena, Innere Med Klin, D-6900 Jena, Germany

来源：

MOLECULAR BIOLOGY AND EVOLUTION | 2003年 / 20卷 / 09期

关键词：

Amborella; chloroplast genomes; angiosperms; gymnosperms; molecular evolution; substitution rates;

D O I：

10.1093/molbev/msg159

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Phylogenetic analyses based on comparison of a limited number of genes recently suggested that Amborella trichopoda is the most ancient angiosperm. Here we present the complete sequence of the chloroplast genome of this plant. It does not display any of the genes characteristic of chloroplast DNA of the gymnosperm Pinus thunbergii (chlB, chlL, chlN, psaM, and ycf12). The majority of phylogenetic analyses of protein-coding genes of this chloroplast DNA suggests that Amborella is not the basal angiosperm and not even the most basal among dicots.

引用

页码：1499 / 1505

页数：7

共 51 条

[1]

[Anonymous], 1978, Atlas of protein sequence and structure

[2]

Arber E.A. N., 1907, Journal of the Linnean Society of London, Botany, V38, P29, DOI DOI 10.1111/J.1095-8339.1907.TB01074.X

[3] Studies on the evolution of the angiosperms. The relationship of the angiosperms to the gnetales. [J].

Arber, E. A. Newell ;

Parkin, John .

ANNALS OF BOTANY, 1908, 22 (85-88) :489-515

[4]

Bailey I. W., 1948, JOUR ARNOLD ARBORETUM, V29, P245

[5]

Baillon H, 1869, HIST PLANTES, V1

[6] Independent and combined analyses of sequences from all three genomic compartments converge on the root of flowering plant phylogeny [J].

Barkman, TJ ;

Chenery, G ;

McNeal, JR ;

Lyons-Weiler, J ;

Ellisens, WJ ;

Moore, G ;

Wolfe, AD ;

dePamphilis, CW .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (24) :13166-13171

[7]

BENTHAM G, 1880, GEERA PLANTARUM, V3

[8]

CRONQUIST A, 1981, INTEGRATED SYSTEM CL

[9] Base-calling of automated sequencer traces using phred.: I.: Accuracy assessment [J].

Ewing, B ;

Hillier, L ;

Wendl, MC ;

Green, P .

GENOME RESEARCH, 1998, 8 (03) :175-185

[10]

Felsenstein J., 1989, CLADISTICS, V5, P164, DOI DOI 10.1111/J.1096-0031.1989.TB00562.X

← 1 2 3 4 5 6 →