DNA repair glycosylases with a [4Fe-4S] cluster: A redox cofactor for DNA-mediated charge transport?

被引:45
作者
Boal, Amie K. [1 ]
Yavin, Eylon [1 ]
Barton, Jacqueline K. [1 ]
机构
[1] CALTECH, Dept Chem & Chem Engn, Pasadena, CA 91125 USA
关键词
DNA damage; DNA repair;
D O I
10.1016/j.jinorgbio.2007.05.001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The [4Fe-4S] cluster is ubiquitous to a class of base excision repair enzymes in organisms ranging from bacteria to man and was first considered as a structural element, owing to its redox stability under physiological conditions. When studied bound to DNA, two of these repair proteins (MutY and Endonuclease III from Escherichia coli) display DNA-dependent reversible electron transfer with characteristics typical of high potential iron proteins. These results have inspired a reexamination of the role of the [4Fe-4S] cluster in this class of enzymes. Might the [4Fe-4S] cluster be used as a redox cofactor to search for damaged sites using DNA-mediated charge transport, a process well known to be highly sensitive to lesions and mismatched bases? Described here are experiments demonstrating the utility of DNA-mediated charge transport in characterizing these DNA-binding metalloproteins, as well as efforts to elucidate this new function for DNA as an electronic signaling medium among the proteins. (c) 2007 Elsevier Inc. All rights reserved.
引用
收藏
页码:1913 / 1921
页数:9
相关论文
共 79 条
[1]   Inherited variants of MYH associated with somatic G:C→T:A mutations in colorectal tumors [J].
Al-Tassan, N ;
Chmiel, NH ;
Maynard, J ;
Fleming, N ;
Livingston, AL ;
Williams, GT ;
Hodges, AK ;
Davies, DR ;
David, SS ;
Sampson, JR ;
Cheadle, JR .
NATURE GENETICS, 2002, 30 (02) :227-232
[2]  
[Anonymous], 2005, DNA REPAIR MUTAGENES
[3]   Long-range oxidation of guanine by Ru(III) in duplex DNA [J].
Arkin, MR ;
Stemp, EDA ;
Pulver, SC ;
Barton, JK .
CHEMISTRY & BIOLOGY, 1997, 4 (05) :389-400
[4]   Influence of intervening mismatches on long-range guanine oxidation in DNA duplexes [J].
Bhattacharya, PK ;
Barton, JK .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2001, 123 (36) :8649-8656
[5]   A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA [J].
Blainey, PC ;
van Oijent, AM ;
Banerjee, A ;
Verdine, GL ;
Xie, XS .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (15) :5752-5757
[6]   Electrochemical detection of lesions in DNA [J].
Boal, AK ;
Barton, JK .
BIOCONJUGATE CHEMISTRY, 2005, 16 (02) :312-321
[7]   DNA-bound redox activity of DNA repair glycosylases containing [4Fe-4S] clusters [J].
Boal, AK ;
Yavin, E ;
Lukianova, OA ;
O'Shea, VL ;
David, SS ;
Barton, JK .
BIOCHEMISTRY, 2005, 44 (23) :8397-8407
[8]   Mutation detection by electrocatalysis at DNA-modified electrodes [J].
Boon, EM ;
Ceres, DM ;
Drummond, TG ;
Hill, MG ;
Barton, JK .
NATURE BIOTECHNOLOGY, 2000, 18 (10) :1096-1100
[9]   DNA-mediated charge transport for DNA repair [J].
Boon, EM ;
Livingston, AL ;
Chmiel, NH ;
David, SS ;
Barton, JK .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (22) :12543-12547
[10]   An electrical probe of protein-DNA interactions on DNA-modified surfaces [J].
Boon, EM ;
Salas, JE ;
Barton, JK .
NATURE BIOTECHNOLOGY, 2002, 20 (03) :282-286