Study on the structure-activity relationship of watermelon seed antioxidant peptides by using molecular simulations

被引:67
作者
Wen, Chaoting [1 ]
Zhang, Jixian [2 ]
Zhang, Haihui [1 ]
Duan, Yuqing [1 ]
Ma, Haile [1 ]
机构
[1] Jiangsu Univ, Sch Food & Biol Engn, Zhenjiang 212013, Jiangsu, Peoples R China
[2] Yangzhou Univ, Coll Food Sci & Engn, Yangzhou 225127, Jiangsu, Peoples R China
关键词
Watermelon seed antioxidant peptides; Structure-activity relationship; Quantum chemistry; Molecular docking; Keap1-Nrf2; IN-VITRO ANTIOXIDANT; IDENTIFICATION; ACTIVATION; MECHANISM; DOCKING; KEAP1; NRF2; QSAR; SKIN;
D O I
10.1016/j.foodchem.2021.130432
中图分类号
O69 [应用化学];
学科分类号
070301 [无机化学];
摘要
Our previous studies had shown that watermelon seed antioxidant peptides (WSAPs: P1-P5) possessed good activities. However, the structure-activity relationship of P1 is still unclear. Quantum chemistry and molecular docking were used to investigate the antioxidant mechanism of P1. The active site of P1 is located at C6H14 on Arg. P1 can bind to DPPH/ABTS through hydrogen bond and hydrophobic interaction. Compared with P2-P4, P1 has the strongest antioxidant capacity. The molecular simulation showed that P1 could enhance the stability of Keap1 by interacting with Asn382, Arg380 and Tyr 334 in the active sites. Compared with the model group, the expression of Keap1 was down-regulated (p < 0.05), while the expression of Nrf2 and HO-1 was up-regulated (p < 0.05) after P1 treatment. P1 has the potential ability to activate the signaling pathway Keap1-Nrf2 and improve the antioxidant defense system. This study provides a new perspective for the rational design and mechanism of antioxidant peptides.
引用
收藏
页数:7
相关论文
共 38 条
[1]
Purification, identification and characterization of two novel antioxidant peptides from finger millet (Eleusine coracana) protein hydrolysate [J].
Agrawal, Himani ;
Joshi, Robin ;
Gupta, Mahesh .
FOOD RESEARCH INTERNATIONAL, 2019, 120 :697-707
[2]
Benchmarking of different molecular docking methods for protein-peptide docking [J].
Agrawal, Piyush ;
Singh, Harinder ;
Srivastava, Hemant Kumar ;
Singh, Sandeep ;
Kishore, Gaurav ;
Raghava, Gajendra P. S. .
BMC BIOINFORMATICS, 2019, 19 (Suppl 13)
[3]
Identification of potent antioxidant bioactive peptides from goat milk proteins [J].
Ahmed, Ahmed S. ;
El-Bassiony, Tawfik ;
Elmalt, Laila M. ;
Ibrahim, Hisham R. .
FOOD RESEARCH INTERNATIONAL, 2015, 74 :80-88
[4]
Free Radical Scavenging Properties of Guaiacol Oligomers: A Combined Experimental and Quantum Study of the Guaiacyl-Moiety Role [J].
Anouar, E. ;
Calliste, C. A. ;
Kosinova, P. ;
Di Meo, F. ;
Duroux, J. L. ;
Champavier, Y. ;
Marakchi, K. ;
Trouillas, P. .
JOURNAL OF PHYSICAL CHEMISTRY A, 2009, 113 (50) :13881-13891
[5]
Arise R. O., 2016, Environmental and Experimental Biology, V14, P163
[6]
Structure and function of a novel antioxidant peptide from the skin of tropical frogs [J].
Barbosa, Eder Alves ;
Oliveira, Ana ;
Placido, Alexandra ;
Socodato, Renato ;
Portugal, Camila C. ;
Mafud, Ana Carolina ;
Ombredane, Alicia S. ;
Moreira, Daniel C. ;
Vale, Nuno ;
Bessa, Lucinda J. ;
Joanitti, Graziella A. ;
Alves, Claudia ;
Gomes, Paula ;
Delerue-Matos, Cristina ;
Mascarenhas, Yvonne Primerano ;
Marani, Mariela M. ;
Relvas, Joao B. ;
Pintado, Manuela ;
Leite, Jose Roberto S. A. .
FREE RADICAL BIOLOGY AND MEDICINE, 2018, 115 :68-79
[7]
Nrf2-Keap1 signaling in oxidative and reductive stress [J].
Bellezza, Ilaria ;
Giambanco, Ileana ;
Minelli, Alba ;
Donato, Rosario .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH, 2018, 1865 (05) :721-733
[8]
A DFT method for the study of the antioxidant action mechanism of resveratrol derivatives [J].
Benayahoum, Ali ;
Amira-Guebailia, Habiba ;
Houache, Omar .
JOURNAL OF MOLECULAR MODELING, 2013, 19 (06) :2285-2298
[9]
Cloning, purification and characterisation of cytosolic fructose-1,6-bisphosphatase from mung bean (Vigna radiata) [J].
Chen, Lin ;
Zhao, Xue ;
He, Yun ;
Yang, Hongshun .
FOOD CHEMISTRY, 2021, 347
[10]
DFT-based quantitative structure-activity relationship studies for antioxidant peptides [J].
Cheng, Yunhui ;
Luo, Fang ;
Zeng, Zhiyin ;
Wen, Li ;
Xiao, Zhongliang ;
Bu, Hanping ;
Lv, Fei ;
Xu, Zhou ;
Lin, Qinlu .
STRUCTURAL CHEMISTRY, 2015, 26 (03) :739-747