Metabolic, phylogenetic, and ecological diversity of the methanogenic archaea

被引:988
作者
Liu, Yuchen [1 ]
Whitman, William B. [1 ]
机构
[1] Univ Georgia, Dept Microbiol, Athens, GA 30605 USA
来源
INCREDIBLE ANAEROBES: FROM PHYSIOLOGY TO GENOMICS TO FUELS | 2008年 / 1125卷
关键词
methane; methanogen; methanogenesis; hydrogenotrophic methanogenesis; methylotrophic methanogenesis; aceticlastic methanogenesis;
D O I
10.1196/annals.1419.019
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Although of limited metabolic diversity, methanogenic archaea or methanogens possess great phylogenetic and ecological diversity. Only three types of methanogenic pathways are known: CO2-reduction, methyl-group, reduction, and the aceticlastic reaction. Cultured methanogens are grouped into five orders based upon their phylogeny and phenotypic properties. In addition, uncultured methanogens that may represent new orders are present in many environments. The ecology of methanogens highlights their complex interactions with other anaerobes and the physical and chemical factors controlling their function.
引用
收藏
页码:171 / 189
页数:19
相关论文
共 147 条
[31]  
Deppenmeier U, 2002, J MOL MICROB BIOTECH, V4, P453
[32]   Degradation of pectins with different degrees of esterification by Bacteroides thetaiotaomicron isolated from human gut flora [J].
Dongowski, G ;
Lorenz, A ;
Anger, H .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (04) :1321-1327
[33]   Comparison of Euryarchaea strains in the guts and food-soil of the soil-feeding termite Cubitermes fungifaber across different soil types [J].
Donovan, SE ;
Purdy, KJ ;
Kane, MD ;
Eggleton, P .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 70 (07) :3884-3892
[34]   Acetate utilization and butyryl coenzyme A (CoA):acetate-CoA transferase in butyrate-producing bacteria from the human large intestine [J].
Duncan, SH ;
Barcenilla, A ;
Stewart, CS ;
Pryde, SE ;
Flint, HJ .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2002, 68 (10) :5186-5190
[35]   Hydrogen concentration profiles at the oxic-anoxic interface: a microsensor study of the hindgut of the wood-feeding lower termite Reticulitermes flavipes (Kollar) [J].
Ebert, A ;
Brune, A .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (10) :4039-4046
[36]   Diversity of the human intestinal microbial flora [J].
Eckburg, PB ;
Bik, EM ;
Bernstein, CN ;
Purdom, E ;
Dethlefsen, L ;
Sargent, M ;
Gill, SR ;
Nelson, KE ;
Relman, DA .
SCIENCE, 2005, 308 (5728) :1635-1638
[37]  
Ehhalt D, 2001, CLIMATE CHANGE 2001: THE SCIENTIFIC BASIS, P239
[38]   Isolation of an aceticlastic strain of Methanosarcina siciliae from marine canyon sediments and emendation of the species description for Methanosarcina siciliae [J].
Elberson, MA ;
Sowers, KR .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1997, 47 (04) :1258-1261
[39]   Relations between transit time, fermentation products, and hydrogen consuming flora in healthy humans [J].
ElOufir, L ;
Flourie, B ;
desVarannes, SB ;
Barry, JL ;
Cloarec, D ;
Bornet, F ;
Galmiche, JP .
GUT, 1996, 38 (06) :870-877
[40]   Genome of Rice Cluster I archaea - the key methane producers in the rice rhizosphere [J].
Erkel, Christoph ;
Kube, Michael ;
Reinhardt, Richard ;
Liesack, Werner .
SCIENCE, 2006, 313 (5785) :370-372