The Pseudomonas cellulosa glycoside hydrolase family 51 arabinofuranosidase exhibits wide substrate specificity

被引:61
作者
Beylot, MH
McKie, VA
Voragen, AGJ
Doeswijk-Voragen, CHL
Gilbert, HJ [1 ]
机构
[1] Univ Newcastle Upon Tyne, Dept Biol & Nutr Sci, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
[2] Univ Wageningen & Res Ctr, Dept Agrotechnol & Food Sci, Food Chem Lab, NL-6700 EV Wageningen, Netherlands
关键词
arabinose; catalytic mutant;
D O I
10.1042/0264-6021:3580607
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
To investigate the mechanism by which Pseudomonas cellulosa releases arabinose from polysaccharides and oligosaccharides, a gene library of P. cellulosa genomic DNA was screened for 4-methyluinbelliferyl-alpha -L-arabinofuranosidase (MUAase) activity. A single MUAase gene (abf51A) was isolated, which encoded a non-modular glycoside hydrolase family (GH) 51 arabinofuranosidase (Abf51A) of 57 000 Da. The substrate specificity of the Abf51A showed that it preferentially removed alpha1,2- and alpha1,3-linked arabinofuranose side chains from either arabinan or arabinoxylan, and hydrolysed alpha1,5-linked arabino-oligosaccharides, although at a much lower rate. The activity of Abf51A against arabinoxylan was similar to a GH62 arabinofuranosidase encoded by a P. cellulosa gene. Glu-194 and Glu-321 of Abf51A are conserved in GH51 enzymes, and it has been suggested that these amino acids comprise the key catalytic acid/base and nucleophile residues, respectively. To evaluate this hypothesis the biochemical properties of E194A and E321A mutants of Abf51A were evaluated. The data were consistent with the view that Glu-194 and Glu-321 comprise the key catalytic residues of Abf51A. These data, in conjunction with the results presented in the accompanying paper [Beylot, Emami, McKie, Gilbert and Pell (2001) Biochem. J. 358, 599-605], indicate that P. cellulosa expresses a membrane-bound GH51 arabinofuranosidase that plays a pivotal role in releasing arabinose from a range of polysaccharides and oligosaccharides.
引用
收藏
页码:607 / 614
页数:8
相关论文
共 24 条
[1]  
Bacic A., 1988, BIOCH PLANTS, P297, DOI DOI 10.1016/B978-0-08-092615-5.50014-X
[2]   Pseudomonas cellulosa expresses a single membrane-bound glycoside hydrolase family 51 arabinofuranosidase [J].
Beylot, MH ;
Emami, K ;
McKie, VA ;
Gilbert, HJ ;
Pell, G .
BIOCHEMICAL JOURNAL, 2001, 358 :599-605
[3]   Pseudomonas cellulose-binding domains mediate their effects by increasing enzyme substrate proximity [J].
Bolam, DN ;
Ciruela, A ;
McQueen-Mason, S ;
Simpson, P ;
Williamson, MP ;
Rixon, JE ;
Boraston, A ;
Hazlewood, GP ;
Gilbert, HJ .
BIOCHEMICAL JOURNAL, 1998, 331 :775-781
[4]   A NON-MODULAR ENDO-BETA-1,4-MANNANASE FROM PSEUDOMONAS-FLUORESCENS SUBSPECIES CELLULOSA [J].
BRAITHWAITE, KL ;
BLACK, GW ;
HAZLEWOOD, GP ;
ALI, BRS ;
GILBERT, HJ .
BIOCHEMICAL JOURNAL, 1995, 305 :1005-1010
[5]   The topology of the substrate binding clefts of glycosyl hydrolase family 10 xylanases are not conserved [J].
Charnock, SJ ;
Spurway, TD ;
Xie, HF ;
Beylot, MH ;
Virden, R ;
Warren, RAJ ;
Hazlewood, GP ;
Gilbert, HJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (48) :32187-32199
[6]   Key residues in subsite F play a critical role in the activity of Pseudomonas fluorescens subspecies cellulosa xylanase A against xylooligosaccharides but not against highly polymeric substrates such as xylan [J].
Charnock, SJ ;
Lakey, JH ;
Virden, R ;
Hughes, N ;
Sinnott, ML ;
Hazlewood, GP ;
Pickersgill, R ;
Gilbert, HJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1997, 272 (05) :2942-2951
[7]  
Dekker R F, 1976, Adv Carbohydr Chem Biochem, V32, P277
[8]   ARABINASE GENE-EXPRESSION IN ASPERGILLUS-NIGER - INDICATIONS FOR COORDINATED REGULATION [J].
FLIPPHI, MJA ;
VISSER, J ;
VANDERVEEN, P ;
DEGRAAFF, LH .
MICROBIOLOGY-SGM, 1994, 140 :2673-2682
[9]   CLONING OF THE ASPERGILLUS-NIGER GENE ENCODING ALPHA-L-ARABINOFURANOSIDASE-A [J].
FLIPPHI, MJA ;
VISSER, J ;
VANDERVEEN, P ;
DEGRAAFF, LH .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 1993, 39 (03) :335-340
[10]   Possible roses for a non-modular, thermostable and proteinase-resistant cellulase from the mesophilic aerobic soil bacterium Cellvibrio mixtus [J].
Fontes, CMGA ;
Clarke, JH ;
Hazlewood, GP ;
Fernandes, TH ;
Gilbert, HJ ;
Ferreira, LMA .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 1997, 48 (04) :473-479