Direct measurement of energy thresholds to conformational isomerization in tryptamine

被引:151
作者
Dian, BC [1 ]
Clarkson, JR [1 ]
Zwier, TS [1 ]
机构
[1] Purdue Univ, Dept Chem, W Lafayette, IN 47907 USA
关键词
D O I
10.1126/science.1093731
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Stimulated emission pumping (SEP)-hole filling spectroscopy and SEP-induced population transfer spectroscopy have been used to place narrow bounds on the energy thresholds for isomerization between individual reactant-product isomer pairs involving the seven conformational minima of tryptamine. The thresholds for isomerizing conformer A to all six other conformations divided into three groups at 750 wavenumbers (cm(-1)) (A-->B, F), 1000 cm(-1) [A-->C(2)], and 1280 to 1320 cm(-1) [A-->D, E, and C(1)]. The appearance of the first band and the absence of the band below it were used to place upper and lower bounds to the barrier heights for each process. The thresholds for A-->B and B-->A isomerizations were also combined to determine the relative energies of these two lowest energy minima. The combined data from all X-->Y isomerizations identify important isomerization pathways on the potential energy surface linking the minima.
引用
收藏
页码:1169 / 1173
页数:5
相关论文
共 17 条
[1]   ACCURATE HYDROGEN-BONDING ENERGIES BETWEEN 1-NAPHTHOL AND WATER, METHANOL AND AMMONIA [J].
BURGI, T ;
DROZ, T ;
LEUTWYLER, S .
CHEMICAL PHYSICS LETTERS, 1995, 246 (03) :291-299
[2]   Conformational flexibility in small biomolecules: tryptamine and 3-indole-propionic acid [J].
Carney, JR ;
Zwier, TS .
CHEMICAL PHYSICS LETTERS, 2001, 341 (1-2) :77-85
[3]   The infrared and ultraviolet spectra of individual conformational isomers of biomolecules: Tryptamine [J].
Carney, JR ;
Zwier, TS .
JOURNAL OF PHYSICAL CHEMISTRY A, 2000, 104 (38) :8677-8688
[4]   OBSERVATION AND DESCRIPTION OF A NEW TYPE OF TRANSIENT IN ROTATIONAL COHERENCE SPECTROSCOPY [J].
CONNELL, LL ;
CORCORAN, TC ;
JOIREMAN, PW ;
FELKER, PM .
JOURNAL OF PHYSICAL CHEMISTRY, 1990, 94 (04) :1229-1232
[5]   The dynamics of conformational isomerization in flexible biomolecules. I. Hole-filling spectroscopy of N-acetyl tryptophan methyl amide and N-acetyl tryptophan amide [J].
Dian, BC ;
Longarte, A ;
Winter, PR ;
Zwier, TS .
JOURNAL OF CHEMICAL PHYSICS, 2004, 120 (01) :133-147
[6]  
DIAN BC, IN PRESS J CHEM PHYS
[7]   IR induced cis⇆trans isomerization of 2-naphthol:: Catalytic role of hydrogen-bond in the photoinduced isomerization [J].
Ebata, T ;
Kouyama, K ;
Mikami, N .
JOURNAL OF CHEMICAL PHYSICS, 2003, 119 (06) :2947-2950
[8]   The dynamics of conformational isomerization in flexible biomolecules. II. Simulating isomerizations in a supersonic free jet with master equation dynamics [J].
Evans, DA ;
Wales, DJ ;
Dian, BC ;
Zwier, TS .
JOURNAL OF CHEMICAL PHYSICS, 2004, 120 (01) :148-157
[9]   Free energy landscapes of model peptides and proteins [J].
Evans, DA ;
Wales, DJ .
JOURNAL OF CHEMICAL PHYSICS, 2003, 118 (08) :3891-3897
[10]   Decoding the dynamical information embedded in highly mixed quantum states [J].
Keske, JC ;
Pate, BH .
ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 2000, 51 :323-353