The UCSC Genome Browser database: 2018 update

被引：353

作者：

Casper, Jonathan ^{[1
]}

Zweig, Ann S. ^{[1
]}

Villarreal, Chris ^{[1
]}

Tyner, Cath ^{[1
]}

Speir, Matthew L. ^{[1
]}

Rosenbloom, Kate R. ^{[1
]}

Raney, Brian J. ^{[1
]}

Lee, Christopher M. ^{[1
]}

Lee, Brian T. ^{[1
]}

Karolchik, Donna ^{[1
]}

Hinrichs, Angie S. ^{[1
]}

Haeussler, Maximilian ^{[1
]}

Guruvadoo, Luvina ^{[1
]}

Gonzalez, Jairo Navarro ^{[1
]}

Gibson, David ^{[1
]}

Fiddes, Ian T. ^{[1
]}

Eisenhart, Christopher ^{[1
]}

Diekhans, Mark ^{[1
]}

Clawson, Hiram ^{[1
]}

Barber, Galt P. ^{[1
]}

Armstrong, Joel ^{[1
]}

Haussler, David ^{[1
,2
]}

Kuhn, Robert M. ^{[1
]}

Kent, W. James ^{[1
]}

机构：

[1] Univ Calif Santa Cruz, Genom Inst, Santa Cruz, CA 95064 USA

[2] Univ Calif Santa Cruz, Howard Hughes Med Inst, Santa Cruz, CA 95064 USA

来源：

NUCLEIC ACIDS RESEARCH | 2018年 / 46卷 / D1期

关键词：

COMPREHENSIVE RESOURCE; OFF-TARGET; KEGG; INTEGRATION; ANNOTATION; PROTEINS; CORUM; BASE;

D O I：

10.1093/nar/gkx1020

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

070307 [化学生物学]; 071010 [生物化学与分子生物学];

摘要：

The UCSC Genome Browser (https://genome.ucsc.edu) provides a web interface for exploring annotated genome assemblies. The assemblies and annotation tracks are updated on an ongoing basis-12 assemblies and more than 28 tracks were added in the past year. Two recent additions are a display of CRISPR/Cas9 guide sequences and an interactive navigator for gene interactions. Other upgrades from the past year include a command-line version of the Variant Annotation Integrator, support for Human Genome Variation Society variant nomenclature input and output, and a revised highlighting tool that now supports multiple simultaneous regions and colors.

引用

页码：D762 / D769

页数：8

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