A tylosin ketoreductase reveals how chirality is determined in polyketides

被引:270
作者
Keatinge-Clay, Adrian T. [1 ]
机构
[1] Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94158 USA
来源
CHEMISTRY & BIOLOGY | 2007年 / 14卷 / 08期
关键词
D O I
10.1016/j.chembiol.2007.07.009
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Because it controls the majority of polyketide stereocenters, the ketoreductase (KR) is a central target in engineering polyketide synthases (PKSs). To elucidate the mechanisms of stereocontrol, the structure of KR from the first module of the tylosin PKS was determined. A comparison with a recently solved erythromycin KR that operates on the same substrate explains why their products have opposite ocsubstituent chiralities. The structure reveals how polyketides are guided into the active site by key residues in different KR types. There are four types of reductase-competent KRs, each capable of fixing a unique combination of oc-substituent and beta-hydroxyl group chiralities, as well as two types of reductase-incompetent KRs that control alpha-substituent chirality alone. A protocol to assign how a module will enforce substituent chirality based on its sequence is presented.
引用
收藏
页码:898 / 908
页数:11
相关论文
共 39 条
[1]   Directed mutagenesis alters the stereochemistry of catalysis by isolated ketoreductase domains from the erythromycin polyketide synthase [J].
Baerga-Ortiz, A ;
Popovic, B ;
Siskos, AP ;
O'Hare, HM ;
Spiteller, D ;
Williams, MG ;
Campillo, N ;
Spencer, JB ;
Leadlay, PF .
CHEMISTRY & BIOLOGY, 2006, 13 (03) :277-285
[2]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[3]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[5]   The stereochemistry of ketoreduction [J].
Caffrey, P .
CHEMISTRY & BIOLOGY, 2005, 12 (10) :1060-1062
[6]   MACROLIDE BIOSYNTHESIS .3. STEREOCHEMISTRY OF THE CHAIN-ELONGATION STEPS OF ERYTHROMYCIN BIOSYNTHESIS [J].
CANE, DE ;
LIANG, TC ;
TAYLOR, PB ;
CHANG, C ;
YANG, CC .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1986, 108 (16) :4957-4964
[7]   The tylosin-biosynthetic genes of Streptomyces fradiae [J].
Cundliffe, E ;
Bate, N ;
Butler, A ;
Fish, S ;
Gandecha, A ;
Merson-Davies, L .
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2001, 79 (3-4) :229-234
[8]   ORGANIZATION OF THE ENZYMATIC DOMAINS IN THE MULTIFUNCTIONAL POLYKETIDE SYNTHASE INVOLVED IN ERYTHROMYCIN FORMATION IN SACCHAROPOLYSPORA-ERYTHRAEA [J].
DONADIO, S ;
KATZ, L .
GENE, 1992, 111 (01) :51-60
[9]   Coot:: model-building tools for molecular graphics [J].
Emsley, P ;
Cowtan, K .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 :2126-2132
[10]   The X-ray structure of Brassica napus β-keto acyl carrier protein reductase and its implications for substrate binding and catalysis [J].
Fisher, M ;
Kroon, JTM ;
Martindale, W ;
Stuitje, AR ;
Slabas, AR ;
Rafferty, JB .
STRUCTURE, 2000, 8 (04) :339-347