Molecular rigid-body displacements in a tetragonal lysozyme crystal confirmed by X-ray diffuse scattering

被引:33
作者
Perez, J
Faure, P
Benoit, JP
机构
[1] LURE, Laboratoire CNRS-CEA-MENESR, Université Paris-Sud
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 1996年 / 52卷
关键词
D O I
10.1107/S0907444996002594
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
X-ray diffuse scattering from protein crystals is, at the moment, the only available experimental process to be directly sensitive to long-range correlations between protein-atom displacements. It is shown here that calculations based on independent rigid-body displacements of individual molecules yield a description in good agreement with the experimental diffuse-scattering pattern displayed by tetragonal crystals of hen egg-white lysozyme (HEWL) In particular, it appears that molecular rigid-body translations and rigid-body rotations appear roughly in the same proportion as the average atomic mean-square positional fluctuations. The crystallographic temperature-factor analysis by TLS (translation/libration/screw) refinement, performed by Sternberg, Grace & Phillips [Sternberg, Grace, & Phillips (1979). J. Mel. Biol. 130, 231-253], is then confirmed and completed by a quantitative estimation of the molecular rigid-body translation contributions. The major contribution of molecular rigid-body displacements to the average atomic mean-square positional fluctuations, contradicts a previous analysis of the tetragonal HEWL diffuse-scattering data by Clarage, Clarage, Phillips, Sweet & Caspar [Clarage, Clarage, Phillips, Sweet & Caspar (1992). Proteins Struct. Funct. Genet. 12. 145-157] which concluded that short-range correlations dominate. The origin of these opposite conclusions mostly lies in the different hypotheses made to model diffuse scattering, underlying the limits of the 'homogeneous disorder' model.
引用
收藏
页码:722 / 729
页数:8
相关论文
共 28 条
[1]  
Amoros J. L., 1968, MOL CRYSTALS TRANSFO
[2]   CRYSTALLOGRAPHIC STUDIES OF THE DYNAMIC PROPERTIES OF LYSOZYME [J].
ARTYMIUK, PJ ;
BLAKE, CCF ;
GRACE, DEP ;
OATLEY, SJ ;
PHILLIPS, DC ;
STERNBERG, MJE .
NATURE, 1979, 280 (5723) :563-568
[3]   DIFFUSE-SCATTERING IN PROTEIN CRYSTALLOGRAPHY [J].
BENOIT, JP ;
DOUCET, J .
QUARTERLY REVIEWS OF BIOPHYSICS, 1995, 28 (02) :131-169
[4]   LIQUID-LIKE MOVEMENTS IN CRYSTALLINE INSULIN [J].
CASPAR, DLD ;
CLARAGE, J ;
SALUNKE, DM ;
CLARAGE, M .
NATURE, 1988, 332 (6165) :659-662
[5]   DIFFUSE-X-RAY SCATTERING FROM TROPOMYOSIN CRYSTALS [J].
CHACKO, S ;
PHILLIPS, GN .
BIOPHYSICAL JOURNAL, 1992, 61 (05) :1256-1266
[6]   CORRELATIONS OF ATOMIC MOVEMENTS IN LYSOZYME CRYSTALS [J].
CLARAGE, JB ;
CLARAGE, MS ;
PHILLIPS, WC ;
SWEET, RM ;
CASPAR, DLD .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1992, 12 (02) :145-157
[7]   THE DETERMINATION OF THE ANISOTROPIC THERMAL MOTION OF ATOMS IN CRYSTALS [J].
CRUICKSHANK, DWJ .
ACTA CRYSTALLOGRAPHICA, 1956, 9 (08) :747-753
[8]   THE ANALYSIS OF THE ANISOTROPIC THERMAL MOTION OF MOLECULES IN CRYSTALS [J].
CRUICKSHANK, DWJ .
ACTA CRYSTALLOGRAPHICA, 1956, 9 (08) :754-756
[9]   DYNAMICAL TRANSITION OF MYOGLOBIN REVEALED BY INELASTIC NEUTRON-SCATTERING [J].
DOSTER, W ;
CUSACK, S ;
PETRY, W .
NATURE, 1989, 337 (6209) :754-756
[10]   MOLECULAR-DYNAMICS STUDIED BY ANALYSIS OF THE X-RAY DIFFUSE-SCATTERING FROM LYSOZYME CRYSTALS [J].
DOUCET, J ;
BENOIT, JP .
NATURE, 1987, 325 (6105) :643-646