Characterisation of interferon α-2b by liquid chromatography and mass spectrometry techniques

Interferon alpha-2b produced by Escherichia coli consists of 165 amino acids and contains two disulphide bonds; its purity was confirmed by LC-UV (DAD)7FLD and LC-MS techniques. A C-4 column was used with UV detection at 214 nm; diode array detector (DAD) spectra were recorded from 200-400 nm and fluorescence detection was performed at specific wavelengths of trypthophan emission and excitation. Peptide mapping was performed with trypsin. Peptides produced by trypsin digestion were analysed by LC-UV (DAD)-FLD, LC-MS, and LC-MS/MS using a C-18 column. Amino acid sequence coverage was about 95%. UV spectra in the range from 200 nm to 400 nm, emission (Em) and excitation (Ex) spectra of each separated peptide were additionally compared with spectra of the same peptide produced by digestion of European Pharmacopaeia interferon alpha-2b standard (spectral matching). The chromatogram of any interferon alpha-2b (drug substance or certificated standard) sample produced in the same manner with the same amino acid composition should be similar to the chromatogram obtained by the method described in this paper. Molecular masses of peptides were obtained from MS experiments and MS/MS experiments gave additional structural information. The molecular mass of interferon alpha-2b was obtained by MALDI-TOF MS analysis in linear mode, with an accuracy comparable to the theoretical average mass +/-5 atomic mass units. The molecular mass was obtained from the deconvoluted ESI mass spectrum.