Cytogenetic analysis and construction of a BAC contig across a common neocentromeric region from 9p

被引:25
作者
Satinover, DL
Vance, GH
Van Dyke, DL
Schwartz, S [1 ]
机构
[1] Case Western Reserve Univ, Sch Med, Dept Genet, Cleveland, OH 44106 USA
[2] Case Western Reserve Univ, Sch Med, Ctr Human Genet, Cleveland, OH 44106 USA
[3] Univ Hosp Cleveland, Cleveland, OH 44106 USA
[4] Indiana Univ, Sch Med, Dept Med & Mol Genet, Indianapolis, IN 46204 USA
[5] Henry Ford Hosp, Detroit, MI 48202 USA
关键词
D O I
10.1007/s004120100143
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Over 40 cases of neocentric marker chromosomes, without detectable a-satellite DNA, have been reported. Although these have originated from many different chromosomes, a few of these chromosomes have been involved in multiple cases of marker formation. In this study, two different markers originating from the short arm of chromosome 9 were analyzed, identifying a common neocentromeric region. A bacterial artificial chromosome (BAC) contig extending over more than 900 kb has been assembled across this neocentromeric region. Fluorescent in situ hybridization and immunofluorescence assays (CENP-C and CENP-E) have localized the neocentromere to a 500 kb region. Preliminary analysis of DNA sequences in this neocentromere revealed a highly AT-rich region, which also has an increase in the level of retroviral elements compared. with the average levels in the genome.
引用
收藏
页码:275 / 283
页数:9
相关论文
共 17 条
[1]   A SIMPLE METHOD FOR FUSING HUMAN-LYMPHOCYTES WITH RODENT CELLS IN MONOLAYER BY POLYETHYLENE-GLYCOL [J].
BRAHE, C ;
SERRA, A .
SOMATIC CELL GENETICS, 1981, 7 (01) :109-115
[2]   Characterization of neo-centromeres in marker chromosomes lacking detectable alpha-satellite DNA [J].
Depinet, TW ;
Zackowski, JL ;
Earnshaw, WC ;
Kaffe, S ;
Sekhon, GS ;
Stallard, R ;
Sullivan, BA ;
Vance, GH ;
VanDyke, DL ;
Willard, HF ;
Zinn, AB ;
Schwartz, S .
HUMAN MOLECULAR GENETICS, 1997, 6 (08) :1195-1204
[3]  
duSart D, 1997, NAT GENET, V16, P144
[4]   Mammalian artificial chromosome formation from circular alphoid input DNA does not require telomere repeats [J].
Ebersole, TA ;
Ross, A ;
Clark, E ;
McGill, N ;
Schindelhauer, D ;
Cooke, H ;
Grimes, B .
HUMAN MOLECULAR GENETICS, 2000, 9 (11) :1623-1631
[5]   INTEGRATION OF HUMAN ALPHA-SATELLITE DNA INTO SIMIAN CHROMOSOMES - CENTROMERE PROTEIN-BINDING AND DISRUPTION OF NORMAL CHROMOSOME SEGREGATION [J].
HAAF, T ;
WARBURTON, PE ;
WILLARD, HF .
CELL, 1992, 70 (04) :681-696
[6]   Formation of de novo centromeres and construction of first-generation human artificial microchromosomes [J].
Harrington, JJ ;
VanBokkelen, G ;
Mays, RW ;
Gustashaw, K ;
Willard, HF .
NATURE GENETICS, 1997, 15 (04) :345-355
[7]   DE-NOVO FORMATION OF SEVERAL FEATURES OF A CENTROMERE FOLLOWING INTRODUCTION OF A Y-ALPHOID YAC INTO MAMMALIAN-CELLS [J].
LARIN, Z ;
FRICKER, MD ;
TYLERSMITH, C .
HUMAN MOLECULAR GENETICS, 1994, 3 (05) :689-695
[8]   RAPID ISOLATION OF DNA PROBES WITHIN SPECIFIC CHROMOSOME REGIONS BY INTERSPERSED REPETITIVE SEQUENCE POLYMERASE CHAIN-REACTION [J].
LEDBETTER, SA ;
NELSON, DL ;
WARREN, ST ;
LEDBETTER, DH .
GENOMICS, 1990, 6 (03) :475-481
[9]   FURTHER EVIDENCE THAT CENP-C IS A NECESSARY COMPONENT OF ACTIVE CENTROMERES - STUDIES OF A DIC(X-15) WITH SIMULTANEOUS IMMUNOFLUORESCENCE AND FISH [J].
PAGE, SL ;
EARNSHAW, WC ;
CHOO, KHA ;
SHAFFER, LG .
HUMAN MOLECULAR GENETICS, 1995, 4 (02) :289-294
[10]   CYTOGENETIC ANALYSIS USING QUANTITATIVE, HIGH-SENSITIVITY, FLUORESCENCE HYBRIDIZATION [J].
PINKEL, D ;
STRAUME, T ;
GRAY, JW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (09) :2934-2938