共 18 条
Adjusted Wallace Coefficient as a Measure of Congruence between Typing Methods
被引:138
作者:

Severiano, Ana
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Lisbon, Inst Med Mol, Inst Microbiol, Fac Med, Lisbon, Portugal Univ Lisbon, Inst Med Mol, Inst Microbiol, Fac Med, Lisbon, Portugal

Pinto, Francisco R.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Lisbon, Fac Ciencias, Ctr Quim & Bioquim, Dept Quim & Bioquim, Lisbon, Portugal Univ Lisbon, Inst Med Mol, Inst Microbiol, Fac Med, Lisbon, Portugal

Ramirez, Mario
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Lisbon, Inst Med Mol, Inst Microbiol, Fac Med, Lisbon, Portugal Univ Lisbon, Inst Med Mol, Inst Microbiol, Fac Med, Lisbon, Portugal

Carrico, Joao A.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Lisbon, Inst Med Mol, Inst Microbiol, Fac Med, Lisbon, Portugal Univ Lisbon, Inst Med Mol, Inst Microbiol, Fac Med, Lisbon, Portugal
机构:
[1] Univ Lisbon, Inst Med Mol, Inst Microbiol, Fac Med, Lisbon, Portugal
[2] Univ Lisbon, Fac Ciencias, Ctr Quim & Bioquim, Dept Quim & Bioquim, Lisbon, Portugal
关键词:
TANDEM-REPEAT ANALYSIS;
METHICILLIN-RESISTANT;
SURVEILLANCE;
POPULATION;
PNEUMONIAE;
STRAINS;
CLONES;
D O I:
10.1128/JCM.00624-11
中图分类号:
Q93 [微生物学];
学科分类号:
071005 ;
100705 ;
摘要:
We propose a new coefficient, the adjusted Wallace coefficient (AW), and corresponding confidence intervals (CI) as quantitative measures of congruence between typing methods. The performance of the derived CI was evaluated using simulated data. Published microbial typing data were used to demonstrate the advantages of AW over the Wallace coefficient.
引用
收藏
页码:3997 / 4000
页数:4
相关论文
共 18 条
[1]
On similarity indices and correction for chance agreement
[J].
Albatineh, Ahmed N.
;
Niewiadomska-Bugaj, Magdalena
;
Mihalko, Daniel
.
JOURNAL OF CLASSIFICATION,
2006, 23 (02)
:301-313

Albatineh, Ahmed N.
论文数: 0 引用数: 0
h-index: 0
机构:
Nova SE Univ, Div Mat Sci & Technol, Ft Lauderdale, FL 33314 USA Nova SE Univ, Div Mat Sci & Technol, Ft Lauderdale, FL 33314 USA

Niewiadomska-Bugaj, Magdalena
论文数: 0 引用数: 0
h-index: 0
机构: Nova SE Univ, Div Mat Sci & Technol, Ft Lauderdale, FL 33314 USA

Mihalko, Daniel
论文数: 0 引用数: 0
h-index: 0
机构: Nova SE Univ, Div Mat Sci & Technol, Ft Lauderdale, FL 33314 USA
[2]
The DiversiLab system versus pulsed-field gel electrophoresis: Characterisation of extended spectrum β-lactamase producing Escherichia coli and Klebsiella pneumoniae
[J].
Brolund, Alma
;
Haeggman, Sara
;
Edquist, Petra J.
;
Gezelius, Lena
;
Olsson-Liljequist, Barbro
;
Wisell, Karin Tegmark
;
Giske, Christian G.
.
JOURNAL OF MICROBIOLOGICAL METHODS,
2010, 83 (02)
:224-230

Brolund, Alma
论文数: 0 引用数: 0
h-index: 0
机构:
Swedish Inst Infect Dis Control, Stockholm, Sweden
Karolinska Inst, Dept Microbiol Tumor & Cell Biol MTC, Stockholm, Sweden Swedish Inst Infect Dis Control, Stockholm, Sweden

Haeggman, Sara
论文数: 0 引用数: 0
h-index: 0
机构:
Swedish Inst Infect Dis Control, Stockholm, Sweden Swedish Inst Infect Dis Control, Stockholm, Sweden

Edquist, Petra J.
论文数: 0 引用数: 0
h-index: 0
机构:
Swedish Inst Infect Dis Control, Stockholm, Sweden Swedish Inst Infect Dis Control, Stockholm, Sweden

Gezelius, Lena
论文数: 0 引用数: 0
h-index: 0
机构:
Swedish Inst Infect Dis Control, Stockholm, Sweden Swedish Inst Infect Dis Control, Stockholm, Sweden

Olsson-Liljequist, Barbro
论文数: 0 引用数: 0
h-index: 0
机构:
Swedish Inst Infect Dis Control, Stockholm, Sweden Swedish Inst Infect Dis Control, Stockholm, Sweden

Wisell, Karin Tegmark
论文数: 0 引用数: 0
h-index: 0
机构:
Swedish Inst Infect Dis Control, Stockholm, Sweden
Karolinska Inst, Dept Microbiol Tumor & Cell Biol MTC, Stockholm, Sweden Swedish Inst Infect Dis Control, Stockholm, Sweden

Giske, Christian G.
论文数: 0 引用数: 0
h-index: 0
机构:
Karolinska Inst, Dept Microbiol Tumor & Cell Biol MTC, Stockholm, Sweden
Karolinska Univ Hosp, Stockholm, Sweden Swedish Inst Infect Dis Control, Stockholm, Sweden
[3]
Illustration of a common framework for relating multiple typing methods by application to macrolide-resistant Streptococcus pyogenes
[J].
Carrico, J. A.
;
Silva-Costa, C.
;
Melo-Cristino, J.
;
Pinto, F. R.
;
de Lencastre, H.
;
Almeida, J. S.
;
Ramirez, M.
.
JOURNAL OF CLINICAL MICROBIOLOGY,
2006, 44 (07)
:2524-2532

Carrico, J. A.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Nova Lisboa, Inst Tecnol Quim & Biol, Grp Biomatemat, P-2780 Oeiras, Portugal

Silva-Costa, C.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Nova Lisboa, Inst Tecnol Quim & Biol, Grp Biomatemat, P-2780 Oeiras, Portugal

Melo-Cristino, J.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Nova Lisboa, Inst Tecnol Quim & Biol, Grp Biomatemat, P-2780 Oeiras, Portugal

Pinto, F. R.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Nova Lisboa, Inst Tecnol Quim & Biol, Grp Biomatemat, P-2780 Oeiras, Portugal

de Lencastre, H.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Nova Lisboa, Inst Tecnol Quim & Biol, Grp Biomatemat, P-2780 Oeiras, Portugal

Almeida, J. S.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Nova Lisboa, Inst Tecnol Quim & Biol, Grp Biomatemat, P-2780 Oeiras, Portugal

Ramirez, M.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Nova Lisboa, Inst Tecnol Quim & Biol, Grp Biomatemat, P-2780 Oeiras, Portugal
[4]
Multiplex Real-Time PCR for Rapid Staphylococcal Cassette Chromosome mec Typing
[J].
Chen, Liang
;
Mediavilla, Jose R.
;
Oliveira, Duarte C.
;
Willey, Barbara M.
;
de Lencastre, Herminia
;
Kreiswirth, Barry N.
.
JOURNAL OF CLINICAL MICROBIOLOGY,
2009, 47 (11)
:3692-3706

Chen, Liang
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Med & Dent New Jersey, Int Ctr Publ Hlth, Publ Hlth Res Inst Ctr, Newark, NJ 07103 USA Univ Med & Dent New Jersey, Int Ctr Publ Hlth, Publ Hlth Res Inst Ctr, Newark, NJ 07103 USA

Mediavilla, Jose R.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Med & Dent New Jersey, Int Ctr Publ Hlth, Publ Hlth Res Inst Ctr, Newark, NJ 07103 USA Univ Med & Dent New Jersey, Int Ctr Publ Hlth, Publ Hlth Res Inst Ctr, Newark, NJ 07103 USA

Oliveira, Duarte C.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Nova Lisboa, Fac Ciencias & Tecnol, CREM Ctr Microbiol Resources, Caparica, Portugal Univ Med & Dent New Jersey, Int Ctr Publ Hlth, Publ Hlth Res Inst Ctr, Newark, NJ 07103 USA

Willey, Barbara M.
论文数: 0 引用数: 0
h-index: 0
机构:
Mt Sinai Hosp, Dept Microbiol, Toronto, ON M5G 1X5, Canada Univ Med & Dent New Jersey, Int Ctr Publ Hlth, Publ Hlth Res Inst Ctr, Newark, NJ 07103 USA

de Lencastre, Herminia
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Nova Lisboa, Inst Tecnol Quim & Biol, Mol Genet Lab, P-2780156 Oeiras, Portugal
Rockefeller Univ, Microbiol Lab, New York, NY 10065 USA Univ Med & Dent New Jersey, Int Ctr Publ Hlth, Publ Hlth Res Inst Ctr, Newark, NJ 07103 USA

Kreiswirth, Barry N.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Med & Dent New Jersey, Int Ctr Publ Hlth, Publ Hlth Res Inst Ctr, Newark, NJ 07103 USA Univ Med & Dent New Jersey, Int Ctr Publ Hlth, Publ Hlth Res Inst Ctr, Newark, NJ 07103 USA
[5]
Analysis of typing methods for epidemiological surveillance of both methicillin-resistant and methicillin-susceptible Staphylococcus aureus strains
[J].
Faria, Nuno A.
;
Carrico, Joao A.
;
Oliveira, Duarte C.
;
Ramirez, Mario
;
de Lencastre, Herminia
.
JOURNAL OF CLINICAL MICROBIOLOGY,
2008, 46 (01)
:136-144

Faria, Nuno A.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Nova Lisboa, Inst Tecnol Quim & Biol, Mol Genet Lab, P-2780 Oeiras, Portugal Inst Engn Sistemas & Computadores, Invest & Desenvolvimento INESC ID, Knowledge Discovery Bioinformat Grp KDBIO, P-1000029 Lisbon, Portugal

Carrico, Joao A.
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Engn Sistemas & Computadores, Invest & Desenvolvimento INESC ID, Knowledge Discovery Bioinformat Grp KDBIO, P-1000029 Lisbon, Portugal Inst Engn Sistemas & Computadores, Invest & Desenvolvimento INESC ID, Knowledge Discovery Bioinformat Grp KDBIO, P-1000029 Lisbon, Portugal

Oliveira, Duarte C.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Nova Lisboa, Inst Tecnol Quim & Biol, Mol Genet Lab, P-2780 Oeiras, Portugal Inst Engn Sistemas & Computadores, Invest & Desenvolvimento INESC ID, Knowledge Discovery Bioinformat Grp KDBIO, P-1000029 Lisbon, Portugal

Ramirez, Mario
论文数: 0 引用数: 0
h-index: 0
机构:
Fac Med Lisbon, Inst Mol Med, Lisbon, Portugal
Fac Med Lisbon, Inst Microbiol, Lisbon, Portugal Inst Engn Sistemas & Computadores, Invest & Desenvolvimento INESC ID, Knowledge Discovery Bioinformat Grp KDBIO, P-1000029 Lisbon, Portugal

de Lencastre, Herminia
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Nova Lisboa, Inst Tecnol Quim & Biol, Mol Genet Lab, P-2780 Oeiras, Portugal
Rockefeller Univ, Microbiol Lab, New York, NY 10021 USA Inst Engn Sistemas & Computadores, Invest & Desenvolvimento INESC ID, Knowledge Discovery Bioinformat Grp KDBIO, P-1000029 Lisbon, Portugal
[6]
eBURST: Inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data
[J].
Feil, EJ
;
Li, BC
;
Aanensen, DM
;
Hanage, WP
;
Spratt, BG
.
JOURNAL OF BACTERIOLOGY,
2004, 186 (05)
:1518-1530

Feil, EJ
论文数: 0 引用数: 0
h-index: 0
机构: Univ Bath, Dept Biol & Biochem, Bath BA2 7AY, Avon, England

Li, BC
论文数: 0 引用数: 0
h-index: 0
机构: Univ Bath, Dept Biol & Biochem, Bath BA2 7AY, Avon, England

Aanensen, DM
论文数: 0 引用数: 0
h-index: 0
机构: Univ Bath, Dept Biol & Biochem, Bath BA2 7AY, Avon, England

Hanage, WP
论文数: 0 引用数: 0
h-index: 0
机构: Univ Bath, Dept Biol & Biochem, Bath BA2 7AY, Avon, England

Spratt, BG
论文数: 0 引用数: 0
h-index: 0
机构: Univ Bath, Dept Biol & Biochem, Bath BA2 7AY, Avon, England
[7]
Nonoutbreak surveillance of group A streptococci causing invasive disease in Portugal identified internationally disseminated clones among members of a genetically heterogeneous population
[J].
Friaes, A.
;
Ramirez, M.
;
Melo-Cristino, J.
.
JOURNAL OF CLINICAL MICROBIOLOGY,
2007, 45 (06)
:2044-2047

Friaes, A.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Lisbon, Inst Microbiol, Fac Med, Inst Mol Med, PT-1649028 Lisbon, Portugal Univ Lisbon, Inst Microbiol, Fac Med, Inst Mol Med, PT-1649028 Lisbon, Portugal

Ramirez, M.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Lisbon, Inst Microbiol, Fac Med, Inst Mol Med, PT-1649028 Lisbon, Portugal Univ Lisbon, Inst Microbiol, Fac Med, Inst Mol Med, PT-1649028 Lisbon, Portugal

Melo-Cristino, J.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Lisbon, Inst Microbiol, Fac Med, Inst Mol Med, PT-1649028 Lisbon, Portugal Univ Lisbon, Inst Microbiol, Fac Med, Inst Mol Med, PT-1649028 Lisbon, Portugal
[8]
COMPARING PARTITIONS
[J].
HUBERT, L
;
ARABIE, P
.
JOURNAL OF CLASSIFICATION,
1985, 2 (2-3)
:193-218

HUBERT, L
论文数: 0 引用数: 0
h-index: 0
机构:
UNIV CALIF SANTA BARBARA,DEPT PSYCHOL,SANTA BARBARA,CA 93106 UNIV CALIF SANTA BARBARA,DEPT PSYCHOL,SANTA BARBARA,CA 93106

ARABIE, P
论文数: 0 引用数: 0
h-index: 0
机构:
UNIV CALIF SANTA BARBARA,DEPT PSYCHOL,SANTA BARBARA,CA 93106 UNIV CALIF SANTA BARBARA,DEPT PSYCHOL,SANTA BARBARA,CA 93106
[9]
Evaluation of Mycobacterial Interspersed Repetitive-Unit-Variable-Number Tandem-Repeat Analysis and Spoligotyping for Genotyping of Mycobacterium bovis Isolates and a Comparison with Restriction Fragment Length Polymorphism Typing
[J].
McLernon, Joanne
;
Costello, Eamon
;
Flynn, Orla
;
Madigan, Gillian
;
Ryan, Fergus
.
JOURNAL OF CLINICAL MICROBIOLOGY,
2010, 48 (12)
:4541-4545

McLernon, Joanne
论文数: 0 引用数: 0
h-index: 0
机构:
Backweston Lab Complex, Cent Vet Res Lab, Celbridge, Co Kildare, Ireland
Dublin Inst Technol, Dublin 2, Ireland Backweston Lab Complex, Cent Vet Res Lab, Celbridge, Co Kildare, Ireland

Costello, Eamon
论文数: 0 引用数: 0
h-index: 0
机构:
Backweston Lab Complex, Cent Vet Res Lab, Celbridge, Co Kildare, Ireland Backweston Lab Complex, Cent Vet Res Lab, Celbridge, Co Kildare, Ireland

Flynn, Orla
论文数: 0 引用数: 0
h-index: 0
机构:
Backweston Lab Complex, Cent Vet Res Lab, Celbridge, Co Kildare, Ireland Backweston Lab Complex, Cent Vet Res Lab, Celbridge, Co Kildare, Ireland

Madigan, Gillian
论文数: 0 引用数: 0
h-index: 0
机构:
Backweston Lab Complex, Cent Vet Res Lab, Celbridge, Co Kildare, Ireland Backweston Lab Complex, Cent Vet Res Lab, Celbridge, Co Kildare, Ireland

论文数: 引用数:
h-index:
机构:
[10]
Based Upon Repeat Pattern (BURP):: an algorithm to characterize the long-term evolution of Staphylococcus aureus populations based on spa polymorphisms
[J].
Mellmann, Alexander
;
Weniger, Thomas
;
Berssenbruegge, Christoph
;
Rothgaenger, Joerg
;
Sammeth, Michael
;
Stoye, Jens
;
Harmsen, Dag
.
BMC MICROBIOLOGY,
2007, 7 (1)

Mellmann, Alexander
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Hosp Munster, Inst Hyg, Munster, Germany Univ Hosp Munster, Dept Periodontol, Munster, Germany

Weniger, Thomas
论文数: 0 引用数: 0
h-index: 0
机构: Univ Hosp Munster, Dept Periodontol, Munster, Germany

Berssenbruegge, Christoph
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Hosp Munster, Inst Hyg, Munster, Germany Univ Hosp Munster, Dept Periodontol, Munster, Germany

Rothgaenger, Joerg
论文数: 0 引用数: 0
h-index: 0
机构:
Ridom GmbH, Wurzburg, Germany Univ Hosp Munster, Dept Periodontol, Munster, Germany

Sammeth, Michael
论文数: 0 引用数: 0
h-index: 0
机构:
Ctr Genom Regulat, Barcelona, Spain Univ Hosp Munster, Dept Periodontol, Munster, Germany

Stoye, Jens
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Bielefeld, Fac Technol, Bielefeld, Germany Univ Hosp Munster, Dept Periodontol, Munster, Germany

Harmsen, Dag
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Hosp Munster, Dept Periodontol, Munster, Germany Univ Hosp Munster, Dept Periodontol, Munster, Germany