e-LiSe - an online tool for finding needles in the '(Medline) haystack'

被引:6
作者
Gladki, Arek [1 ]
Siedlecki, Pawel [1 ,2 ]
Kaczanowski, Szymon [1 ]
Zielenkiewicz, Piotr [1 ,2 ]
机构
[1] Polish Acad Sci, Inst Biochem, Bioinformat Dept, PL-02106 Warsaw, Poland
[2] Warsaw Univ, Dept Plant Mol Biol, Warsaw, Poland
关键词
D O I
10.1093/bioinformatics/btn086
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Using literature databases one can find not only known and true relations between processes but also less studied, non-obvious associations. The main problem with discovering such type of relevant biological information is 'selection'. The ability to distinguish between a true correlation (e.g. between different types of biological processes) and random chance that this correlation is statistically significant is crucial for any bio-medical research, literature mining being no exception. This problem is especially visible when searching for information which has not been studied and described in many publications. Therefore, a novel bio-linguistic statistical method is required, capable of selecting true correlations, even when they are low-frequency associations. In this article, we present such statistical approach based on Z-score and implemented in a web-based application 'e-LiSe'.
引用
收藏
页码:1115 / 1117
页数:3
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