Molecular modelling of 2′-OH mediated hydrogen bonding in ribonucleos(t)ides by NMR constrained AM1 and MMX calculations

被引:3
作者
Acharya, P [1 ]
Velikian, I [1 ]
Acharya, S [1 ]
Chattopadhyaya, J [1 ]
机构
[1] Univ Uppsala, Ctr Biomed, Dept Bioorgan Chem, S-75123 Uppsala, Sweden
关键词
D O I
10.1081/NCN-100002521
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The intra- and intermolecular hydrogen bonding (DeltaG(298K)degrees approximate to 2 kcal mol(-1)) of 2'-OH in nucleos(t)ides has been reported by the temperature- and concentration-dependent NMR study in conjunction with dihedral dependence of the NMR derived both endo ((3)J(H,H))- and exocyclic ((3)J(H,OH)) coupling constants, nOe contacts and lineshape analyses of hydroxyl protons for EtpA (1), 3'-dA (2), rA (3), 2'-dA (4) [Fig. 1] in DMSO-d(6) at 500 MHz.
引用
收藏
页码:1211 / 1217
页数:7
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