Processing bodies require RNA for assembly and contain nontranslating mRNAs

被引:540
作者
Teixeira, D
Sheth, U
Valencia-Sanchez, MA
Brengues, M
Parker, R [1 ]
机构
[1] Univ Arizona, Dept Mol & Cellular Biol, Tucson, AZ 85721 USA
[2] Univ Arizona, Howard Hughes Med Inst, Tucson, AZ 85721 USA
关键词
decapping; P-bodies; stress; translation;
D O I
10.1261/rna.7258505
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Recent experiments have defined cytoplasmic foci, referred to as processing bodies (P-bodies), wherein mRNA decay factors are concentrated and where mRNA decay can occur. However, the physical nature of P-bodies, their relationship to translation, and possible roles of P-bodies in cellular responses remain unclear. We describe four properties of yeast P-bodies that indicate that P-bodies are dynamic structures that contain nontranslating mRNAs and function during cellular responses to stress. First, in vivo and in vitro analysis indicates that P-bodies are dependent on RNA for their formation. Second, the number and size of P-bodies vary in response to glucose deprivation, osmotic stress, exposure to ultraviolet light, and the stage of cell growth. Third, P-bodies vary with the status of the cellular translation machinery. Inhibition of translation initiation by mutations, or cellular stress, results in increased P-bodies. In contrast, inhibition of translation elongation, thereby trapping the mRNA in polysomes, leads to dissociation of P-bodies. Fourth, multiple translation factors and ribosomal proteins are lacking from P-bodies. These results suggest additional biological roles of P-bodies in addition to being sites of mRNA degradation.
引用
收藏
页码:371 / 382
页数:12
相关论文
共 46 条
  • [1] The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex
    Anderson, JSJ
    Parker, R
    [J]. EMBO JOURNAL, 1998, 17 (05) : 1497 - 1506
  • [2] Anderson P, 2002, J CELL SCI, V115, P3227
  • [3] Glucose depletion rapidly inhibits translation initiation in yeast
    Ashe, MP
    De Long, SK
    Sachs, AB
    [J]. MOLECULAR BIOLOGY OF THE CELL, 2000, 11 (03) : 833 - 848
  • [4] A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates
    Bashkirov, VI
    Scherthan, H
    Solinger, JA
    Buerstedde, JM
    Heyer, WD
    [J]. JOURNAL OF CELL BIOLOGY, 1997, 136 (04) : 761 - 773
  • [5] BEELMAN CA, 1994, J BIOL CHEM, V269, P9687
  • [6] A genome-wide screen in Saccharomyces cerevisiae for genes affecting UV radiation sensitivity
    Birrell, GW
    Giaever, G
    Chu, AM
    Davis, RW
    Brown, JM
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (22) : 12608 - 12613
  • [7] Pre-mRNA processing factors are required for nuclear export
    Brodsky, AS
    Silver, PA
    [J]. RNA, 2000, 6 (12) : 1737 - 1749
  • [8] Eukaryotic mRNA decapping
    Coller, J
    Parker, R
    [J]. ANNUAL REVIEW OF BIOCHEMISTRY, 2004, 73 : 861 - 890
  • [9] The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes
    Coller, JM
    Tucker, M
    Sheth, U
    Valencia-Sanchez, MA
    Parker, R
    [J]. RNA, 2001, 7 (12) : 1717 - 1727
  • [10] Cytoplasmic foci are sites of mRNA decay in human cells
    Cougot, N
    Babajko, S
    Séraphin, B
    [J]. JOURNAL OF CELL BIOLOGY, 2004, 165 (01) : 31 - 40