A mitogenomic perspective on the basal teleostean phylogeny: Resolving higher-level relationships with longer DNA sequences

被引:174
作者
Inoue, JG
Miya, M
Tsukamoto, K
Nishida, M
机构
[1] Univ Tokyo, Ocean Res Inst, Nakano Ku, Tokyo 1648639, Japan
[2] Natl Hist Museum & Inst, Dept Zool, Chuo Ku, Chiba 2608682, Japan
基金
日本学术振兴会;
关键词
mitogenomics; Teleostei; complete mtDNA sequence; long PCR; taxonomic sampling; higher-level relationships;
D O I
10.1006/mpev.2001.0970
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A recent study demonstrated that mitochondrial genomic (mitogenomic) data comprising nucleotide sequences from the concatenated protein-coding (no 3rd codon positions) plus transfer RNA (stem regions only) genes reproduced the expected phylogeny of teleosts with high statistical support. We reexamined the interrelationships of the five major, basal teleostean lineages (Osteoglossomorpha, Elopomorpha, Clupeomorpha, Ostariophysi, and Protacanthopterygii; given various rankings) using mitogenomic data for which five alternative phylogenetic hypotheses have been previously proposed on the basis of both morphological and molecular analyses. In addition to previously determined complete mitochondrial DNA (mtDNA) sequences from eight basal teleosts and two outgroups, we determined the complete mtDNA sequences (excluding a portion of the control region) for two, purposefully chosen species of Osteoglossomorpha (Osteoglossum bicirrhosum and Pantodon buchholzi), and the data were subjected to maximum-parsimony and maximum-likelihood analyses. The resultant tree topologies from the two methods were congruent, although they differed from any of the previously proposed hypotheses. Furthermore, the mitogenomic data confidently rejected all of these hypotheses with high statistical significance. (C) 2001 Academic Press.
引用
收藏
页码:275 / 285
页数:11
相关论文
共 51 条
[1]   SEQUENCE AND ORGANIZATION OF THE HUMAN MITOCHONDRIAL GENOME [J].
ANDERSON, S ;
BANKIER, AT ;
BARRELL, BG ;
DEBRUIJN, MHL ;
COULSON, AR ;
DROUIN, J ;
EPERON, IC ;
NIERLICH, DP ;
ROE, BA ;
SANGER, F ;
SCHREIER, PH ;
SMITH, AJH ;
STADEN, R ;
YOUNG, IG .
NATURE, 1981, 290 (5806) :457-465
[2]  
[Anonymous], 1984, FISHES WORLD
[3]  
[Anonymous], INTERRELATIONSHIPS F
[4]  
[Anonymous], 2001, SCIENCE
[5]  
[Anonymous], 1976, FISHES WORLD
[6]   Basal teleosts and teleostean phylogeny: Response to C. Patterson [J].
Arratia, G .
COPEIA, 1998, (04) :1109-1113
[7]  
Arratia Gloria, 1997, Palaeo Ichthyologica, V7, P5
[8]  
Arratia Gloria, 1991, P249
[9]  
Carroll RL., 1988, VERTEBRATE PALEONTOL
[10]   THE COMPLETE NUCLEOTIDE-SEQUENCE AND GENE ORGANIZATION OF CARP (CYPRINUS-CARPIO) MITOCHONDRIAL GENOME [J].
CHANG, YS ;
HUANG, FL ;
LO, TB .
JOURNAL OF MOLECULAR EVOLUTION, 1994, 38 (02) :138-155