Non-Gaussian statistics of anomalous diffusion: The DNA sequences of prokaryotes

被引:20
作者
Allegrini, P
Buiatti, M
Grigolini, P
West, BJ
机构
[1] Ist Nazl Fis Mat, Unita Ric Pisa, I-56100 Pisa, Italy
[2] Univ Pisa, Dipartimento Fis, I-56100 Pisa, Italy
[3] CNR, Ist Biofis, I-56127 Pisa, Italy
[4] Univ N Texas, Ctr Nonlinear Sci, Denton, TX 76203 USA
来源
PHYSICAL REVIEW E | 1998年 / 58卷 / 03期
关键词
D O I
10.1103/PhysRevE.58.3640
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
We adopt a non-Gaussian indicator to measure the deviation from Gaussian statistics of a diffusion process generated by dichotomous fluctuations with infinite memory. We also make analytical predictions on the transient behavior of the non-Gaussian indicator as well as on its stationary value. We then apply this non-Gaussian analysis to the DNA sequences of prokaryotes adopting a theoretical model where the "DNA dynamics" are assumed to be determined by the statistical superposition of two independent generators of fluctuations: a generator of fluctuations with no correlation and a generator of fluctuations with infinite correlation "time." We study also the influence that the finite length of the observed sequences has on the non-Gaussian statistics of diffusion. We find that these non-Gaussian effects are blurred by the joint action of short-range fluctuation and sequence truncation. Nevertheless, under proper conditions, fulfilled by all the DNA sequences of prokaryotes that have been examined, a non-Gaussian signature remains to signal the correlated nature of the driving process.
引用
收藏
页码:3640 / 3648
页数:9
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