Erythrobacter vulgaris sp..nov., a novel organism isolated from the marine invertebrates

被引:38
作者
Ivanova, EP
Bowman, JP
Lysenko, AM
Zhukova, NV
Gorshkova, NM
Kuznetsova, TA
Kalinovskaya, NI
Shevchenko, LS
Mikhailov, VV
机构
[1] Swinburne Univ Technol, Hawthorn, Vic 3122, Australia
[2] Russian Acad Sci, Far Eastern Branch, Pacific Inst Bioorgan Chem, Vladivostok 690022, Russia
[3] Univ Tasmania, Sch Agr Sci, Hobart, Tas 7001, Australia
[4] Russian Acad Sci, Inst Microbiol, Moscow 117811, Russia
[5] Russian Acad Sci, Far Eastern Branch, Inst Marine Biol, Vladivostok 690041, Russia
基金
俄罗斯基础研究基金会; 澳大利亚研究理事会;
关键词
Erythrobacter vulgaris; Alphaproteobacteria;
D O I
10.1016/j.syapm.2004.11.001
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Four yellow-pigmented, Gram-negative, chemoorganotrophic aerobic bacteria were isolated from starfish Stellaster equestris (strains 022-2-10(T), 022-2-9, and 022-2-12) and soft coral (unidentified species) (strain 022-4-7) collected in the South China Sea. 16S rRNA gene sequence-based analyses of the new organisms revealed that Erythrobacter spp. were the closest relatives and shared the highest similarity of 98.7% to E. citreus, 98.5% to E. flavus, 97.9% to E. litoralis and 97.6% to E longus. The novel organisms were tolerant to 3-6% NaCl, grew between 10 degrees C and 40 degrees C, and were not able to degrade gelatin, casein, and agar, while degraded Tween 80. Two strains (022-2-9 and 022-2-12) could weakly degrade starch. All strains produced a large pool of carotenoids and did not have Bacteriochlorophyll a. Phosphatidylethanolamine (30-36%), phosphatidylglycerol (39-46%), and phosphatidyleholine (21-27%) were the predominant phospholipids. Sphingoglycolipid was not detected. The major fatty acids were 16:0 (6-11%), 16:10)7 (12-15%), and 18:1 omega 7 (46-49%). The two-hydroxy fatty acids, 13:0-2OH, 14:0-2OH, 15:0-2OH, 16:0-2OH were also present. The G + C content of the DNAs ranged from 61 to 62 mol%. The level of DNA similarity among four strains was conspecific and ranged from 94% to 98%. Even though new strains and other species of the genus had rather high level of 16S rRNA gene sequence similarities, DNA-DNA hybridization experiments showed only 33-39% of binding with the DNA of the type strains. On the basis of these results and the significant differences demonstrated in the phenotypic and chemotaxonomic characteristics, it is suggested that the new organisms be classified as a novel species; the name Erythrobacter vulgaris sp. nov. is proposed. The type strain is 022-2-10(T) (= KMM 3465(T) = CIP 107841(T)). (c) 2004 Elsevier GmbH. All rights reserved.
引用
收藏
页码:123 / 130
页数:8
相关论文
共 26 条
[1]  
[Anonymous], 1979, J HIGH RESOLUT CHROM, DOI DOI 10.1002/JHRC.1240021107
[2]  
BLIGH EG, 1953, CAN J BIOCH PHYSL, V7, P911
[3]   Chemotaxonomic characterisation of Sphingomonas [J].
Busse, HJ ;
Kämpfer, P ;
Denner, EBM .
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY, 1999, 23 (4-5) :242-251
[4]  
Christie WW, 1982, LIPID ANAL
[5]  
DELEY J, 1970, EUR J BIOCHEM, V12, P133
[6]  
Denner EBM, 2002, INT J SYST EVOL MICR, V52, P1655, DOI [10.1099/ijs.0.01885-0, 10.1099/00207713-52-5-1655]
[7]  
FELSTENSTEIN J, 1993, PHYLIP VERSION 3 5C
[8]   PORPHYROBACTER-NEUSTONENSIS GEN-NOV, SP-NOV, AN AEROBIC BACTERIOCHLOROPHYLL-SYNTHESIZING BUDDING BACTERIUM FROM FRESH-WATER [J].
FUERST, JA ;
HAWKINS, JA ;
HOLMES, A ;
SLY, LI ;
MOORE, CJ ;
STACKEBRANDT, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1993, 43 (01) :125-134
[9]   Shewanella pacifica sp nov., a polyunsaturated fatty acid-producing bacterium isolated from sea water [J].
Ivanova, EP ;
Gorshkova, NM ;
Bowman, JP ;
Lysenko, AM ;
Zhukova, NV ;
Sergeev, AF ;
Mikhailov, VV ;
Nicolau, DV .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2004, 54 :1083-1087
[10]   Characterization and identification of marine Alteromonas nigrifaciens strains and emendation of the description [J].
Ivanova, EP ;
Kiprianova, EA ;
Mikhailov, VV ;
Levanova, GF ;
Garagulya, AD ;
Gorshkova, NM ;
Yumoto, N ;
Yoshikawa, S .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (01) :223-228