An ancestral polymorphic allele of the human autophagy-related gene IRGM1 is associated with altered gene expression and a genetic risk for Crohn's Disease (CD). We used the single nucleotide polymorphism rs10065172C/T as a marker of this polymorphic allele and genotyped 370 African American and 177 Caucasian tuberculosis (TB) cases and 180 African American and 110 Caucasian controls. Among African Americans, the TB cases were more likely to carry the CD-related T allele of rs10065172 (odds ratio of 1.54; 95% confidence interval, 1.17-2.02; P<0.01) compared to controls. Our finding suggests that this CD-related IRGM1 polymorphic allele is also associated with human susceptibility to TB disease among African Americans.
机构:
Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
Howard Hughes Med Inst, Seattle, WA USAUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Bekpen, Cemalettin
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Marques-Bonet, Tomas
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Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
UPF CSIC, Inst Biol Evolut, Barcelona, SpainUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Marques-Bonet, Tomas
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Alkan, Can
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Antonacci, Francesca
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Leogrande, Maria Bruna
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Ventura, Mario
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Univ Bari, Bari, ItalyUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Ventura, Mario
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Kidd, Jeffrey M.
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Univ Washington, Dept Genome Sci, Seattle, WA 98195 USAUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Kidd, Jeffrey M.
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Siswara, Priscillia
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Howard, Jonathan C.
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Eichler, Evan E.
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机构:
Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
Howard Hughes Med Inst, Seattle, WA USAUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
机构:
Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
Howard Hughes Med Inst, Seattle, WA USAUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Bekpen, Cemalettin
;
Marques-Bonet, Tomas
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
UPF CSIC, Inst Biol Evolut, Barcelona, SpainUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Marques-Bonet, Tomas
;
论文数: 引用数:
h-index:
机构:
Alkan, Can
;
论文数: 引用数:
h-index:
机构:
Antonacci, Francesca
;
论文数: 引用数:
h-index:
机构:
Leogrande, Maria Bruna
;
Ventura, Mario
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bari, Bari, ItalyUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Ventura, Mario
;
Kidd, Jeffrey M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Genome Sci, Seattle, WA 98195 USAUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Kidd, Jeffrey M.
;
论文数: 引用数:
h-index:
机构:
Siswara, Priscillia
;
论文数: 引用数:
h-index:
机构:
Howard, Jonathan C.
;
Eichler, Evan E.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
Howard Hughes Med Inst, Seattle, WA USAUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA