A nanovolume crystallization robot that creates its crystallization screens on-the-fly

被引:14
作者
Hazes, B [1 ]
Price, L [1 ]
机构
[1] Univ Alberta, Edmonton, AB T6G 2M7, Canada
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 2005年 / 61卷
关键词
D O I
10.1107/S0907444905017336
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Protein crystallization generally consists of an initial screen followed by optimization of promising conditions. Whereas the initial screen typically uses a standard set of pre-made crystallization cocktails, optimization requires new cocktails with small perturbations of the original composition. Highly parallel synchronous crystallization robots are ideal for initial screening, but they depend on pre-made crystallization cocktails. Asynchronous crystallization robots can create crystallization cocktails from stock solutions, but in practice this ability is rarely exploited. Instead, large-scale operations typically use a general liquid-handling robot to create optimization screens, whereas academics mostly rely on manual optimization. Here, the use of an asynchronous crystallization robot to create customized crystallization cocktails and set up nanovolume crystallization experiments without a compromise in speed or drop quality is described. This approach avoids the complex integration of hardware, software and dataflow between two robots and saves cost and space. As a proof of principle, a commercial crystal screen has been reproduced with the robot and shows that results are virtually identical to using the actual commercial screen.
引用
收藏
页码:1165 / 1171
页数:7
相关论文
共 28 条
[1]   Recent developments in the PHENIX software for automated crystallographic structure determination [J].
Adams, PD ;
Gopal, K ;
Grosse-Kunstleve, RW ;
Hung, LW ;
Ioerger, TR ;
McCoy, AJ ;
Moriarty, NW ;
Pai, RK ;
Read, RJ ;
Romo, TD ;
Sacchettin, JC ;
Sauter, NK ;
Storoni, LC ;
Terwilligerf, TC .
JOURNAL OF SYNCHROTRON RADIATION, 2004, 11 :53-55
[2]   High-throughput X-ray crystallography for drug discovery [J].
Blundell, TL ;
Patel, S .
CURRENT OPINION IN PHARMACOLOGY, 2004, 4 (05) :490-496
[3]   The role of high-resolution structural studies in the development of commercial enzymes [J].
Bott, R ;
Boelens, R .
CURRENT OPINION IN BIOTECHNOLOGY, 1999, 10 (04) :391-397
[4]  
Chayen Naomi E., 2003, Journal of Structural and Functional Genomics, V4, P115, DOI 10.1023/A:1026174727482
[5]   Protein crystallization for genomics: towards high-throughput optimization techniques [J].
Chayen, NE ;
Saridakis, E .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2002, 58 :921-927
[6]   Towards complete validated models in the next generation of ARP/wARP [J].
Cohen, SX ;
Morris, RJ ;
Fernandez, FJ ;
Ben Jelloul, M ;
Kakaris, M ;
Parthasarathy, V ;
Lamzin, VS ;
Kleywegt, GJ ;
Perrakis, A .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 :2222-2229
[7]   Protein crystallization: virtual screening and optimization [J].
DeLucas, LJ ;
Hamrick, D ;
Cosenza, L ;
Nagy, L ;
McCombs, D ;
Bray, T ;
Chait, A ;
Stoops, B ;
Belgovskiy, A ;
Wilson, WW ;
Parham, M ;
Chernov, N .
PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 2005, 88 (03) :285-309
[8]   Rational protein crystallization by mutational surface engineering [J].
Derewenda, ZS .
STRUCTURE, 2004, 12 (04) :529-535
[9]   Structural genomics in the biotechnology sector [J].
Dry, S ;
McCarthy, S ;
Harris, T .
NATURE STRUCTURAL BIOLOGY, 2000, 7 (Suppl 11) :946-949
[10]   Structural genomics taking shape [J].
Gaasterland, T .
TRENDS IN GENETICS, 1998, 14 (04) :135-135