Free energy of burying hydrophobic residues in the interface between protein subunits

被引:88
作者
Vallone, B [1 ]
Miele, AE [1 ]
Vecchini, P [1 ]
Chiancone, E [1 ]
Brunori, M [1 ]
机构
[1] Univ Rome La Sapienza, Dipartimento Sci Biochim, CNR,Ctr Biol Mol, Fdn Cenci Bolognetti,Inst Pasteur, I-00185 Rome, Italy
关键词
D O I
10.1073/pnas.95.11.6103
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We have obtained an experimental estimate of the free energy change associated with variations at the interface between protein subunits, a subject that has raised considerable interest since the concept of accessible surface area was introduced by Lee and Richards [Lee, E. & Richards, F. M. (1971) J. Mol. Biol. 55, 379-400], We determined by analytical ultracentrifugation the dimer-tetramer equilibrium constant of five single and three double mutants of human Kb, One mutation is at the stationary alpha(1) beta(1) interface, and all of the others are at the sliding alpha(1) beta(2) interface where cleavage of the tetramer into dimers and ligand-linked allosteric changes are known to occur. A surprisingly good linear correlation between the change in the free energy of association of the mutants and the change in buried hydrophobic surface area was obtained, after corrections for the energetic cost of losing steric complementarity at the ap dimer interface, The slope yields an interface stabilization free energy of -15 +/- 1.2 cal/mol upon burial of 1 Angstrom(2) of hydrophobic surface, in very good agreement with the theoretical estimate given by Eisenberg and McLachlan [Eisenberg, D. & McLachlan, A. D. (1986) Nature (London) 319, 199-203].
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页码:6103 / 6107
页数:5
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