Lsr2 of Mycobacterium tuberculosis is a DNA-bridging protein

被引:74
作者
Chen, Jeffrey M. [1 ]
Ren, Huiping [1 ]
Shaw, James E.
Wang, Yu Jing [1 ]
Li, Ming [1 ]
Leung, Andrea S. [1 ]
Tran, Vanessa [1 ]
Berbenetz, Nicolas M. [1 ]
Kocincova, Dana [4 ]
Yip, Christopher M. [2 ]
Reyrat, Jean-Marc [3 ,4 ]
Liu, Jun [1 ]
机构
[1] Univ Toronto, Dept Mol Genet, Toronto, ON M5S 1A8, Canada
[2] Univ Toronto, Dept Biochem, Toronto, ON M5S 3G9, Canada
[3] INSERM, U570, Unite Pathogenie Infect Syst, Grp AVENIR, F-75730 Paris 15, France
[4] Univ Paris 05, Fac Med Rene Descartes, F-75730 Paris 15, France
基金
加拿大健康研究院;
关键词
D O I
10.1093/nar/gkm1162
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Lsr2 is a small, basic protein present in Mycobacterium and related actinomycetes. Recent studies suggest that Lsr2 is a regulatory protein involved in multiple cellular processes including cell wall biosynthesis and antibiotic resistance. However, the underlying molecular mechanisms remain unknown. In this article, we performed biochemical studies of Lsr2DNA interactions and structurefunction analysis of Lsr2. Analysis by atomic force microscopy revealed that Lsr2 has the ability to bridge distant DNA segments, suggesting that Lsr2 plays a role in the overall organization and compactness of the nucleoid. Mutational analysis identified critical residues and selection of dominant negative mutants demonstrated that both DNA binding and protein oligomerization are essential for the normal functions of Lsr2 in vivo. These results provide strong evidence that Lsr2 is a DNA bridging protein, which represents the first identification of such proteins in bacteria phylogenetically distant from the Enterobacteriaceae. DNA bridging by Lsr2 also provides a mechanism of transcriptional regulation by Lsr2.
引用
收藏
页码:2123 / 2135
页数:13
相关论文
共 48 条
[1]   Increased bending rigidity of single DNA molecules by H-NS, a temperature and osmolarity sensor [J].
Amit, R ;
Oppenheim, AB ;
Stavans, J .
BIOPHYSICAL JOURNAL, 2003, 84 (04) :2467-2473
[2]   Twelve species of the nucleoid-associated protein from Escherichia coli -: Sequence recognition specificity and DNA binding affinity [J].
Azam, TA ;
Ishihama, A .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (46) :33105-33113
[3]   The degree of oligomerization of the H-NS nucleoid structuring protein is related to specific binding to DNA [J].
Badaut, C ;
Williams, R ;
Arluison, V ;
Bouffartigues, E ;
Robert, B ;
Buc, H ;
Rimsky, S .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (44) :41657-41666
[4]   DNA-BINDING PARAMETERS OF THE HU PROTEIN OF ESCHERICHIA-COLI TO CRUCIFORM DNA [J].
BONNEFOY, E ;
TAKAHASHI, M ;
YANIV, JR .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 242 (02) :116-129
[5]   HU AND IHF, 2 HOMOLOGOUS HISTONE-LIKE PROTEINS OF ESCHERICHIA-COLI, FORM DIFFERENT PROTEIN DNA COMPLEXES WITH SHORT DNA FRAGMENTS [J].
BONNEFOY, E ;
ROUVIEREYANIV, J .
EMBO JOURNAL, 1991, 10 (03) :687-696
[6]   Tuberculosis - Metabolism and respiration in the absence of growth [J].
Boshoff, HIM ;
Barry, CE .
NATURE REVIEWS MICROBIOLOGY, 2005, 3 (01) :70-80
[7]   H-NS cooperative binding to high-affinity sites in a regulatory element results in transcriptional silencing [J].
Bouffartigues, Emeline ;
Buckle, Malcolm ;
Badaut, Cyril ;
Travers, Andrew ;
Rimsky, Sylvie .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2007, 14 (05) :441-448
[8]   Roles of lsr2 in colony morphology and biofilm formation of Mycobacterium smegmatis [J].
Chen, JM ;
German, GJ ;
Alexander, DC ;
Ren, HP ;
Tan, T ;
Liu, J .
JOURNAL OF BACTERIOLOGY, 2006, 188 (02) :633-641
[9]   Transcriptional regulation of multi-drug tolerance and antibiotic-induced responses by the histone-like protein Lsr2 in M-tuberculosis [J].
Colangeli, Roberto ;
Helb, Danica ;
Vilcheze, Catherine ;
Hazbon, Manzour Hernando ;
Lee, Chee-Gun ;
Safi, Hassan ;
Sayers, Brendan ;
Sardone, Irene ;
Jones, Marcus B. ;
Fleischmann, Robert D. ;
Peterson, Scott N. ;
Jacobs, William R., Jr. ;
Alland, David .
PLOS PATHOGENS, 2007, 3 (06) :780-793
[10]   Bacterial chromatin organization by H-NS protein unravelled using dual DNA manipulation [J].
Dame, Remus T. ;
Noom, Maarten C. ;
Wuite, Gijs J. L. .
NATURE, 2006, 444 (7117) :387-390