FramePlot: a new implementation of the Frame analysis for predicting protein-coding regions in bacterial DNA with a high G plus C content

被引：331

作者：

Ishikawa, J ^{[1
]}

Hotta, K ^{[1
]}

机构：

[1] Natl Inst Infect Dis, Dept Bioact Mol, Tokyo 1628640, Japan

来源：

FEMS MICROBIOLOGY LETTERS | 1999年 / 174卷 / 02期

关键词：

high G plus C content; Streptomyces;

D O I：

10.1111/j.1574-6968.1999.tb13576.x

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

FramePlot is a web-based tool for predicting protein-coding regions in bacterial DNA with a high G+C content, such as Streptomyces. The graphical output provides for easy distinction of protein-coding regions from non-coding regions. The plot is a clickable map. Clicking on an ORF provides not only the nucleotide sequence but also its deduced amino acid sequence. These sequences can then be compared to the NCBI sequence database over the Internet. The program is freely available for academic purposes at http://www.nih.go.jp/-jun/cgi-bin/frameplot.pl. (C) 1999 Federation of European Microbiological Societies. Published by Elsevier Science B.V. All rights reserved.

引用

页码：251 / 253

页数：3