Multiscale entropy analysis of biological signals

被引:1888
作者
Costa, M [1 ]
Goldberger, AL
Peng, CK
机构
[1] Harvard Univ, Sch Med, Beth Israel Deaconess Med Ctr, Margret & HA Rey Inst Nonlinear Dynam Med, Boston, MA 02215 USA
[2] Univ Lisbon, Fac Sci, Inst Biophys & Biomed Engn, P-1749016 Lisbon, Portugal
来源
PHYSICAL REVIEW E | 2005年 / 71卷 / 02期
关键词
D O I
10.1103/PhysRevE.71.021906
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
Traditional approaches to measuring the complexity of biological signals fail to account for the multiple time scales inherent in such time series. These algorithms have yielded contradictory findings when applied to real-world datasets obtained in health and disease states. We describe in detail the basis and implementation of the multiscale entropy (MSE) method. We extend and elaborate previous findings showing its applicability to the fluctuations of the human heartbeat under physiologic and pathologic conditions. The method consistently indicates a loss of complexity with aging, with an erratic cardiac arrhythmia (atrial fibrillation), and with a life-threatening syndrome (congestive heart failure). Further, these different conditions have distinct MSE curve profiles, suggesting diagnostic uses. The results support a general "complexity-loss" theory of aging and disease. We also apply the method to the analysis of coding and noncoding DNA sequences and find that the latter have higher multiscale entropy, consistent with the emerging view that so-called "junk DNA" sequences contain important biological information.
引用
收藏
页数:18
相关论文
共 46 条
  • [1] Long-range correlations between DNA bending sites: Relation to the structure and dynamics of nucleosomes
    Audit, B
    Vaillant, C
    Arneodo, A
    d'Aubenton-Carafa, Y
    Thermes, C
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2002, 316 (04) : 903 - 918
  • [2] Long-range correlations in genomic DNA: A signature of the nucleosomal structure
    Audit, B
    Thermes, C
    Vaillant, C
    d'Aubenton-Carafa, Y
    Muzy, JF
    Ameodo, A
    [J]. PHYSICAL REVIEW LETTERS, 2001, 86 (11) : 2471 - 2474
  • [3] Balocchi R, 1999, ST HEAL T, V60, P91
  • [4] LONG-RANGE CORRELATION-PROPERTIES OF CODING AND NONCODING DNA-SEQUENCES - GENBANK ANALYSIS
    BULDYREV, SV
    GOLDBERGER, AL
    HAVLIN, S
    MANTEGNA, RN
    MATSA, ME
    PENG, CK
    SIMONS, M
    STANLEY, HE
    [J]. PHYSICAL REVIEW E, 1995, 51 (05): : 5084 - 5091
  • [5] Correlated and uncorrelated regions in heart-rate fluctuations during sleep
    Bunde, A
    Havlin, S
    Kantelhardt, JW
    Penzel, T
    Peter, JH
    Voigt, K
    [J]. PHYSICAL REVIEW LETTERS, 2000, 85 (17) : 3736 - 3739
  • [6] Cavalier-Smith T, 1985, EVOLUTION GENOME SIZ
  • [7] Comment on "Multiscale entropy analysis of complex physiologic time series" - Reply
    Costa, M
    Goldberger, AL
    Peng, CK
    [J]. PHYSICAL REVIEW LETTERS, 2004, 92 (08)
  • [8] Multiscale entropy analysis of complex heart rate dynamics: Discrimination of age and heart failure effects
    Costa, M
    Healey, JA
    [J]. COMPUTERS IN CARDIOLOGY 2003, VOL 30, 2003, 30 : 705 - 708
  • [9] Multiscale entropy to distinguish physiologic and synthetic RR time series
    Costa, M
    Goldberger, AL
    Peng, CK
    [J]. COMPUTERS IN CARDIOLOGY 2002, VOL 29, 2002, 29 : 137 - 140
  • [10] Multiscale entropy analysis of human gait dynamics
    Costa, M
    Peng, CK
    Goldberger, AL
    Hausdorff, JM
    [J]. PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2003, 330 (1-2) : 53 - 60