A single active-site region for a group II intron

被引:53
作者
de Lencastre, A
Hamill, S
Pyle, AM
机构
[1] Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA
[2] Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USA
[3] Columbia Univ, Integrated Program Cellular Mol & Biophys Studies, New York, NY 10032 USA
[4] Yale Univ, Howard Hughes Med Inst, New Haven, CT 06520 USA
关键词
D O I
10.1038/nsmb957
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Despite the biological importance of self-splicing group II introns, little is known about their structural organization. Synthetic incorporation of site-specific photo-cross-linkers within catalytic domains resulted in functional distance constraints that, when combined with known tertiary interactions, provide a three-dimensional view of the active intron architecture. All functionalities important for both steps of splicing are proximal before the first step, suggestive of a single active-site region for group II intron catalysis.
引用
收藏
页码:626 / 627
页数:2
相关论文
共 10 条
[1]   Crystal structure of a self-splicing group I intron with both exons [J].
Adams, PL ;
Stahley, MR ;
Kosek, AB ;
Wang, JM ;
Strobel, SA .
NATURE, 2004, 430 (6995) :45-50
[2]   The unusual phylogenetic retrotransposons: A distribution of hypothesis [J].
Boeke, JD .
GENOME RESEARCH, 2003, 13 (09) :1975-1983
[3]   CATALYTIC SITE COMPONENTS COMMON TO BOTH SPLICING STEPS OF A GROUP-II INTRON [J].
CHANFREAU, G ;
JACQUIER, A .
SCIENCE, 1994, 266 (5189) :1383-1387
[4]   An RNA conformational change between the two chemical steps of group II self-splicing [J].
Chanfreau, G ;
Jacquier, A .
EMBO JOURNAL, 1996, 15 (13) :3466-3476
[5]   A three-dimensional perspective on exon binding by a group II self-splicing intron [J].
Costa, M ;
Michel, F ;
Westhof, E .
EMBO JOURNAL, 2000, 19 (18) :5007-5018
[6]   Domains 2 and 3 interact to form critical elements of the group II intron active site [J].
Fedorova, O ;
Mitros, T ;
Pyle, AM .
JOURNAL OF MOLECULAR BIOLOGY, 2003, 330 (02) :197-209
[7]   SPLICE SITE SELECTION AND ROLE OF THE LARIAT IN A GROUP-II INTRON [J].
JACQUIER, A ;
JACQUESSONBREULEUX, N .
JOURNAL OF MOLECULAR BIOLOGY, 1991, 219 (03) :415-428
[8]   Group II introns: Structure and catalytic versatility of large natural ribozymes [J].
Lehmann, K ;
Schmidt, U .
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY, 2003, 38 (03) :249-303
[9]   Deletion of a conserved dinucleotide inhibits the second step of group II intron splicing [J].
Mikheeva, S ;
Murray, HL ;
Zhou, H ;
Turczyk, BM ;
Jarrell, KA .
RNA, 2000, 6 (11) :1509-1515
[10]   Photocrosslinking of 4-thio uracil-containing RNAs supports a side-by-side arrangement of domains 5 and 6 of a group II intron [J].
Podar, M ;
Perlman, PS .
RNA, 1999, 5 (02) :318-329