Imagining Sisyphus happy: DNA barcoding and the unnamed majority

被引:29
作者
Blaxter, Mark [1 ]
机构
[1] Univ Edinburgh, Inst Evolutionary Biol, Edinburgh EH9 3FL, Midlothian, Scotland
基金
英国生物技术与生命科学研究理事会;
关键词
metabarcoding; Sisyphus; meiofauna; PRISTIONCHUS-PACIFICUS; MICROBIAL DIVERSITY; DEEP-SEA; BIODIVERSITY; NEMATODES; POPULATION; PARADIGM; PATTERNS; TAXONOMY; DRIVERS;
D O I
10.1098/rstb.2015.0329
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The vast majority of life on the Earth is physically small, and is classifiable as micro- or meiobiota. These organisms are numerically dominant and it is likely that they are also abundantly speciose. By contrast, the vast majority of taxonomic effort has been expended on 'charismatic megabionts': larger organisms where a wealth of morphology has facilitated Linnaean species definition. The hugely successful Linnaean project is unlikely to be extensible to the totality of approximately 10 million species in a reasonable time frame and thus alternative toolkits and methodologies need to be developed. One such toolkit is DNA barcoding, particularly in its metabarcoding or meta genetics mode, where organisms are identified purely by the presence of a diagnostic DNA sequence in samples that are not processed for morphological identification. Building on secure Linnaean foundations, classification of unknown (and unseen) organisms to molecular operational taxonomic units (MOTUs) and deployment of these MOTUs in biodiversity science promises a rewarding resolution to the Sisyphean task of naming all the world's species. This article is part of the themed issue 'From DNA barcodes to biomes'.
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页数:5
相关论文
共 53 条
[1]  
Amaral Zettler Linda A., 2002, Nature (London), V417, P137, DOI 10.1038/417137a
[2]  
[Anonymous], PLOS BIOL
[3]  
[Anonymous], THE PHYLOGENETIC SYS
[4]  
[Anonymous], FARMING A HAND BOOK
[5]  
[Anonymous], BIOLOGY CATALOG SYNO
[6]  
[Anonymous], NEMATODES AND THEIR
[7]  
[Anonymous], 1942, Le Mythe de Sisyphe
[8]   Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next-generation DNA sequencing [J].
Baird, Donald J. ;
Hajibabaei, Mehrdad .
MOLECULAR ECOLOGY, 2012, 21 (08) :2039-2044
[9]   Moving towards a complete molecular framework of the Nematoda: a focus on the Enoplida and early-branching clades [J].
Bik, Holly M. ;
Lambshead, P. John D. ;
Thomas, W. Kelley ;
Lunt, David H. .
BMC EVOLUTIONARY BIOLOGY, 2010, 10
[10]   Dramatic Shifts in Benthic Microbial Eukaryote Communities following the Deepwater Horizon Oil Spill [J].
Bik, Holly M. ;
Halanych, Kenneth M. ;
Sharma, Jyotsna ;
Thomas, W. Kelley .
PLOS ONE, 2012, 7 (06)