Predicting anti-HIV activity: computational approach using a novel topological descriptor

被引:74
作者
Gupta, S
Singh, M
Madan, AK [1 ]
机构
[1] Maharshi Dayanand Univ, Fac Pharmaceut Sci, Rohtak 124001, Haryana, India
[2] Punjabi Univ, Dept Pharmaceut Sci & Drug Res, Patiala 147002, Punjab, India
关键词
additive adjacency matrices; anti-HIV activity; eccentric adjacency index; first order molecular connectivity index; 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine; HEPT;
D O I
10.1023/A:1011964003474
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The discriminating power of a novel topological descriptor termed as eccentric adjacency index in the estimation of anti-HIV activity, for a data set of 107 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine (HEPT) derivatives was investigated in the present study. The value of eccentric adjacency index of each derivative was computed and active range was identified using moving average analysis. Subsequently, each derivative was assigned a biological activity which was then compared with the reported anti-HIV activity. The accuracy of prediction was found to be more than ninety percent in the active range using eccentric adjacency index. The proposed index offers a vast potential for structure-activity/property studies.
引用
收藏
页码:671 / 678
页数:8
相关论文
共 32 条
  • [1] [Anonymous], 1983, CHEM GRAPH THEORY
  • [2] Balaban A.T., 1980, LECT NOTES CHEM, V15, P22
  • [3] APPLICATIONS OF GRAPH-THEORY IN CHEMISTRY
    BALABAN, AT
    [J]. JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1985, 25 (03): : 334 - 343
  • [4] HIGHLY DISCRIMINATING DISTANCE-BASED TOPOLOGICAL INDEX
    BALABAN, AT
    [J]. CHEMICAL PHYSICS LETTERS, 1982, 89 (05) : 399 - 404
  • [5] BALABAN AT, 1983, TOP CURR CHEM, V114, P21
  • [6] BALABAN AT, 1984, MATH CHEM, V16, P163
  • [7] APPLICATION OF GRAPH-THEORETICAL PARAMETERS IN QUANTIFYING MOLECULAR SIMILARITY AND STRUCTURE-ACTIVITY-RELATIONSHIPS
    BASAK, SC
    BERTELSEN, S
    GRUNWALD, GD
    [J]. JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1994, 34 (02): : 270 - 276
  • [9] Edge adjacency relationships and molecular topographic descriptors. Definition and QSAR applications
    Estrada, E
    Ramirez, A
    [J]. JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1996, 36 (04): : 837 - 843
  • [10] TOPOLOGICAL APPROACH TO DRUG DESIGN
    GALVEZ, J
    GARCIADOMENECH, R
    DEJULIANORTIZ, JV
    SOLER, R
    [J]. JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1995, 35 (02): : 272 - 284