Two Rapidly Growing Mycobacterial Species Isolated from a Brain Abscess: First Whole-Genome Sequences of Mycobacterium immunogenum and Mycobacterium llatzerense

被引：38

作者：

Greninger, Alexander L. ^{[1
,2
]}

Langelier, Charles ^{[3
]}

Cunningham, Gail ^{[1
]}

Keh, Chris ^{[3
]}

Melgar, Michael ^{[4
]}

Chiu, Charles Y. ^{[1
,2
,3
]}

Miller, Steve ^{[1
,2
]}

机构：

[1] Univ Calif San Francisco, Dept Lab Med, San Francisco, CA 94143 USA

[2] Abbott Viral Diagnost & Discovery Ctr, San Francisco, CA USA

[3] Univ Calif San Francisco, Div Infect Dis, Dept Med, San Francisco, CA 94143 USA

[4] Univ Calif San Francisco, Dept Internal Med, San Francisco, CA 94143 USA

来源：

JOURNAL OF CLINICAL MICROBIOLOGY | 2015年 / 53卷 / 07期

关键词：

SP NOV; ALGORITHM; INFECTION; TAP;

D O I：

10.1128/JCM.00402-15

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Rapidly growing mycobacteria are rarely found in central nervous system infections. We describe a case of polymicrobial infection in a brain abscess including two rapidly growing Mycobacterium species, M. immunogenum and M. llatzerense. The Mycobacterium isolates were distinguishable by molecular methods, and whole-genome sequencing showed <60% pairwise nucleotide identity.

引用

页码：2374 / 2377

页数：4

共 21 条

[1] Metagenomic Analysis of Brain Abscesses Identifies Specific Bacterial Associations [J].

Al Masalma, Mouhamad ;

Lonjon, Michel ;

Richet, Herve ;

Dufour, Henry ;

Roche, Pierre-Hugues ;

Drancourt, Michel ;

Raoult, Didier ;

Fournier, Pierre-Edouard .

CLINICAL INFECTIOUS DISEASES, 2012, 54 (02) :202-210

[2]

[Anonymous], 2011, Susceptibility Testing of Mycobacteria

[3] SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].

Bankevich, Anton ;

Nurk, Sergey ;

Antipov, Dmitry ;

Gurevich, Alexey A. ;

Dvorkin, Mikhail ;

Kulikov, Alexander S. ;

Lesin, Valery M. ;

Nikolenko, Sergey I. ;

Son Pham ;

Prjibelski, Andrey D. ;

Pyshkin, Alexey V. ;

Sirotkin, Alexander V. ;

Vyahhi, Nikolay ;

Tesler, Glenn ;

Alekseyev, Max A. ;

Pevzner, Pavel A. .

JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477

[4] Disseminated Mycobacterium immunogenum infection presenting with septic shock and skin lesions in a renal transplant recipient [J].

Biggs, H. M. ;

Chudgar, S. M. ;

Pfeiffer, C. D. ;

Rice, K. R. ;

Zaas, A. K. ;

Wolfe, C. R. .

TRANSPLANT INFECTIOUS DISEASE, 2012, 14 (04) :415-421

[5] Infections due to rapidly growing mycobacteria [J].

De Groote, Mary A. ;

Huitt, Gwen .

CLINICAL INFECTIOUS DISEASES, 2006, 42 (12) :1756-1763

[6] Majority Rules? Tallying the Microbial Census in an Abscess by Means of Molecular Methods [J].

DiGiulio, Daniel B. ;

Relman, David A. .

CLINICAL INFECTIOUS DISEASES, 2009, 48 (09) :1179-1181

[7] Diversity, Community Composition, and Dynamics of Nonpigmented and Late-Pigmenting Rapidly Growing Mycobacteria in an Urban Tap Water Production and Distribution System [J].

Dubrou, S. ;

Konjek, J. ;

Macheras, E. ;

Welte, B. ;

Guidicelli, L. ;

Chignon, E. ;

Joyeux, M. ;

Gaillard, J. L. ;

Heym, B. ;

Tully, T. ;

Sapriel, G. .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2013, 79 (18) :5498-5508

[8] Mycobacterium Ilatzerense sp nov., a facultatively autotrophic, hydrogen-oxidizing bacterium isolated from haemodialysis water [J].

Gomila, Margarita ;

Ramirez, Antonio ;

Gasco, Joan ;

Lalucat, Jorge .

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 :2769-2773

[9] Massive Parallel Sequencing Provides New Perspectives on Bacterial Brain Abscesses [J].

Kommedal, Oyvind ;

Wilhelmsen, Marianne Thulin ;

Skrede, Steinar ;

Meisal, Roger ;

Jakovljev, Aleksandra ;

Gaustad, Peter ;

Hermansen, Nils Olav ;

Vik-Mo, Einar ;

Solheim, Ole ;

Ambur, Ole Herman ;

Saebo, Oystein ;

Hostmlingen, Christina Teisner ;

Helland, Christian .

JOURNAL OF CLINICAL MICROBIOLOGY, 2014, 52 (06) :1990-1997

[10] Towards a genome-based taxonomy for prokaryotes [J].

Konstantinidis, KT ;

Tiedje, JM .

JOURNAL OF BACTERIOLOGY, 2005, 187 (18) :6258-6264

← 1 2 3 →