Quantum mechanical geometry optimization in solution using a finite element continuum electrostatics method

被引:50
作者
Cortis, CM
Langlois, JM
Beachy, MD
Friesner, RA
机构
[1] COLUMBIA UNIV,DEPT CHEM,NEW YORK,NY 10027
[2] COLUMBIA UNIV,CTR BIOMOL SIMULAT,NEW YORK,NY 10027
[3] SCHRODINGER INC,PORTLAND,OR 97204
[4] COLUMBIA UNIV,DEPT APPL PHYS,NEW YORK,NY 10027
关键词
D O I
10.1063/1.472388
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We present a new algorithm for performing ab initio solution phase geometry optimizations. The procedure is based on the self consistent-reaction-field method developed in our laboratory which combines electronic structure calculations with a finite element formulation of the continuum electrostatics problem. A gradient for the total solution phase free energy is obtained by combining different contributions from the gradient of the classical polarization free energy and the derivatives of the quantum mechanical energy. The method used in obtaining the classical gradient is based on exact linear algebra relations and a Green function formalism due to Handy and Schaefer. Both the classical and quantum mechanical gradients are validated by comparison with energy finite differences. The result of applications to a number of small organic compounds are discussed. Comparisons between the predicted location and depth of the various solution phase minima of the Ramachandran map for the alanine dipeptide and those reported by Gould et al. are also presented. (C) 1996 American Institute of Physics.
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页码:5472 / 5484
页数:13
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