Repbase Update, a database of repetitive elements in eukaryotic genomes

被引：2200

作者：

Bao, Weidong ^{[1
]}

Kojima, Kenji K. ^{[1
,2
,3
]}

Kohany, Oleksiy ^{[1
]}

机构：

[1] Genet Informat Res Inst, Los Altos, CA 94022 USA

[2] Univ Tokyo, Grad Sch Frontier Sci, Dept Computat Biol & Med Sci, Minato Ku, Tokyo, Japan

[3] Univ Tokyo, Inst Med Sci, Minato Ku, Tokyo 1088639, Japan

来源：

MOBILE DNA | 2015年 / 6卷

关键词：

Repbase Update; Repbase Reports; Transposable element; RepbaseSubmitter; Database; DE-NOVO IDENTIFICATION; TRANSPOSABLE ELEMENTS; DNA TRANSPOSONS; CLASSIFICATION; FAMILIES; TOOL;

D O I：

10.1186/s13100-015-0041-9

中图分类号：

Q3 [遗传学];

学科分类号：

071007 [遗传学];

摘要：

Repbase Update (RU) is a database of representative repeat sequences in eukaryotic genomes. Since its first development as a database of human repetitive sequences in 1992, RU has been serving as a well- curated reference database fundamental for almost all eukaryotic genome sequence analyses. Here, we introduce recent updates of RU, focusing on technical issues concerning the submission and updating of Repbase entries and will give short examples of using RU data. RU sincerely invites a broader submission of repeat sequences from the research community.

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页数：6

相关论文

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