Solution NMR structure of the cold-shock protein from the hyperthermophilic bacterium Thermotoga maritima

被引:86
作者
Kremer, W [1 ]
Schuler, B [1 ]
Harrieder, S [1 ]
Geyer, M [1 ]
Gronwald, W [1 ]
Welker, C [1 ]
Jaenicke, R [1 ]
Kalbitzer, HR [1 ]
机构
[1] Univ Regensburg, Inst Biophys & Phys Biochem, D-93040 Regensburg, Germany
来源
EUROPEAN JOURNAL OF BIOCHEMISTRY | 2001年 / 268卷 / 09期
关键词
cold-shock protein; hyperthermophiles; NMR spectroscopy; structure determination; Thermotoga maritima;
D O I
10.1046/j.1432-1327.2001.02127.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cold-shock proteins (Csps) are a subgroup of the cold-induced proteins preferentially expressed in bacteria and other organisms on reduction of the growth temperature below the physiological temperature. They are related to the cold-shock domain found in eukaryotes and are some of the most conserved proteins known. Their exact function is still not known, but translational regulation, possibly via RNA chaperoning, has been discussed. Here we present the structure of a hyperthermophilic member of the Csp family. The NMR solution structure of TmCsp from Thermotoga maritima, the hyperthermophilic member of this class of proteins, was solved on the basis of 1015 conformational constraints. It contains five beta strands combined in two antiparallel beta sheets making up a beta barrel structure, in which beta strands 1-4 are arranged in a Greek-key topology. The side chain of R2, which is exclusively found in thermophilic members of the Csp family, probably participates in a peripheral ion cluster involving residues D20, R2, E47 and K63, suggesting that the thermostability of TmCsp is based on the peripheral ion cluster around the side chain of R2.
引用
收藏
页码:2527 / 2539
页数:13
相关论文
共 52 条
[1]   RNA-BINDING PROTEINS AS DEVELOPMENTAL REGULATORS [J].
BANDZIULIS, RJ ;
SWANSON, MS ;
DREYFUSS, G .
GENES & DEVELOPMENT, 1989, 3 (04) :431-437
[2]   COHERENCE TRANSFER BY ISOTROPIC MIXING - APPLICATION TO PROTON CORRELATION SPECTROSCOPY [J].
BRAUNSCHWEILER, L ;
ERNST, RR .
JOURNAL OF MAGNETIC RESONANCE, 1983, 53 (03) :521-528
[3]  
BRUGER AT, 1992, XPLOR MANUAL VERSION
[4]   CONSERVED STRUCTURES AND DIVERSITY OF FUNCTIONS OF RNA-BINDING PROTEINS [J].
BURD, CG ;
DREYFUSS, G .
SCIENCE, 1994, 265 (5172) :615-621
[5]   THE BACKBONE STRUCTURE OF THE MAJOR COLD-SHOCK PROTEIN CS7.4 OF ESCHERICHIA-COLI IN SOLUTION INCLUDES EXTENSIVE BETA-SHEET STRUCTURE [J].
CHATTERJEE, S ;
JIANG, WN ;
EMERSON, SD ;
INOUYE, M .
JOURNAL OF BIOCHEMISTRY, 1993, 114 (05) :663-669
[6]   Determination of mean and standard deviation of dihedral angles [J].
Döker, R ;
Maurer, T ;
Kremer, W ;
Neidig, KP ;
Kalbitzer, HR .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1999, 257 (02) :348-350
[7]  
DOKER R, 2000, CYCLIST MANUAL
[8]   Solution NMR structure and backbone dynamics of the major cold-shock protein (CspA) from Escherichia coli:: Evidence for conformational dynamics in the single-stranded RNA-binding site [J].
Feng, WQ ;
Tejero, R ;
Zimmerman, DE ;
Inouye, M ;
Montelione, GT .
BIOCHEMISTRY, 1998, 37 (31) :10881-10896
[9]   Does the elimination of ion pairs affect the thermal stability of cold shock protein from the hyperthermophilic bacterium Thermatoga maritima? [J].
Frankenberg, N ;
Welker, C ;
Jaenicke, R .
FEBS LETTERS, 1999, 454 (03) :299-302
[10]   Computer assisted assignment of 13C or 15N edited 3D-NOESY-HSQC spectra using back calculated and experimental spectra [J].
Görler, A ;
Gronwald, W ;
Neidig, KP ;
Kalbitzer, HR .
JOURNAL OF MAGNETIC RESONANCE, 1999, 137 (01) :39-45