The role of side chain conformational flexibility in surface recognition by Tenebrio molitor antifreeze protein

被引:29
作者
Daley, ME
Sykes, BD [1 ]
机构
[1] Univ Alberta, Dept Biochem, CIHR, Grp Prot Struct & Funct, Edmonton, AB T6G 2H7, Canada
[2] Univ Alberta, Prot Engn Network Ctr Excellence, Edmonton, AB T6G 2H7, Canada
关键词
antifreeze protein; beta-helix; nuclear magnetic resonance; side chain dynamics;
D O I
10.1110/ps.0369503
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Two-dimensional nuclear magnetic resonance spectroscopy was used to investigate the flexibility of the threonine side chains in the beta-helical Tenebrio molitor antifreeze protein (TmAFP) at low temperatures. From measurement of the (3)J(alphabeta) H-1-H-1 scalar coupling constants, the chi(1) angles and preferred rotamer populations can be calculated. It was determined that the threonines on the ice-binding face of the protein adopt a preferred rotameric conformation at near freezing temperatures, whereas the threonines not on the ice-binding face sample many rotameric states. This suggests that TmAFP maintains a preformed ice-binding conformation in solution, wherein the rigid array of threonines that form the AFP-ice interface matches the ice crystal lattice. A key factor in binding to the ice surface and inhibition of ice crystal growth appears to be the close surface-to-surface complementarity between the AFP and crystalline ice, and the lack of an entropic penalty associated with freezing out motions in a flexible ligand.
引用
收藏
页码:1323 / 1331
页数:9
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