The Structure of the FnIII Tandem A77-A78 Points to a Periodically Conserved Architecture in the Myosin-Binding Region of Titin

被引:29
作者
Bucher, Rainer M. [2 ]
Svergun, Dmitri I. [1 ]
Muhle-Goll, Claudia [3 ]
Mayans, Olga [2 ,4 ]
机构
[1] DESY, European Mol Biol Lab, Hamburg Outstn, D-22603 Hamburg, Germany
[2] Univ Basel, Biozentrum, Div Struct Biol, CH-4056 Basel, Switzerland
[3] European Mol Biol Lab, D-69117 Heidelberg, Germany
[4] Univ Liverpool, Sch Biol Sci, Liverpool L69 7ZB, Merseyside, England
基金
瑞士国家科学基金会;
关键词
A-band titin; FnIII tandem; X-ray protein crystallography; small-angle X-ray scattering (SAXS); sequence motif conservation; SMALL-ANGLE SCATTERING; BIOLOGICAL MACROMOLECULES; STRUCTURE ELASTICITY; IG TANDEMS; PROTEIN; MUSCLE; FIBRONECTIN; MODULES; FLEXIBILITY; RESOLUTION;
D O I
10.1016/j.jmb.2010.06.011
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Titin is a large intrasarcomeric protein that, among its many roles in muscle, is thought to modulate the in vivo assembly of the myosin motor filament. This is achieved through the molecular template properties of its A-band region, which is composed of fibronectin type III (FnIII) and immunoglobulin (Ig) domains organized into characteristic 7-domain (D-zone) and 11-domain (C-zone) superrepeats. Currently, there is little knowledge on the structural details of this region of titin. Here we report the conformational characterization of three FnIII tandems, A77-A78, A80-A82, and A84-A86, which are components of the representative fourth C-zone superrepeat. The structure of A77-A78 has been elucidated by X-ray crystallography to 1.65 angstrom resolution, while low-resolution models of A80-A82 and A84-A86 have been calculated using small-angle X-ray scattering. A77-A78 adopts an extended "up down" domain arrangement, where domains are connected by a hydrophilic three-residue linker sequence. The linker is embedded in a rich network of polar contacts at the domain interface that results in a stiff molecular conformation. The models of A80-A82 and A84-A86, which contain hydrophobic six-residue-long interdomain linkers, equally showed elongated molecular shapes, but with slightly coiled or zigzagged conformations. Small-angle X-ray scattering data further suggested that the long linkers do not result in a noticeable increase in molecular flexibility but lead to semibent domain arrangements. Our findings indicate that the structural characteristics of FnIII tandems from A-band titin contrast markedly with those of poly-Ig tandems from the elastic I-band, which exhibit domain interfaces depleted of interactions and compliant conformations. Furthermore, the analysis of sequence conservation in FnIII domains from A-band titin points to the existence of conformationally defined interfaces at specific superrepeat positions, possibly leading to a periodic and locally ordered architecture supporting the molecular scaffold properties of this region of titin. Crown Copyright (C) 2010 Published by Elsevier Ltd. All rights reserved.
引用
收藏
页码:843 / 853
页数:11
相关论文
共 48 条
[1]   PHENIX:: building new software for automated crystallographic structure determination [J].
Adams, PD ;
Grosse-Kunstleve, RW ;
Hung, LW ;
Ioerger, TR ;
McCoy, AJ ;
Moriarty, NW ;
Read, RJ ;
Sacchettini, JC ;
Sauter, NK ;
Terwilliger, TC .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2002, 58 :1948-1954
[2]   Modularity and homology: Modelling of the titin type I modules and their interfaces [J].
Amodeo, P ;
Fraternali, F ;
Lesk, AM ;
Pastore, A .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 311 (02) :283-296
[3]  
[Anonymous], 1982, Small angle x-ray scattering, DOI DOI 10.1002/ACTP.1985.010360520
[4]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[5]   The complete gene sequence of titin, expression of an unusual ≈700-kDa titin isoform, and its interaction with obscurin identify a novel Z-line to I-band linking system [J].
Bang, ML ;
Centner, T ;
Fornoff, F ;
Geach, AJ ;
Gotthardt, M ;
McNabb, M ;
Witt, CC ;
Labeit, D ;
Gregorio, CC ;
Granzier, H ;
Labeit, S .
CIRCULATION RESEARCH, 2001, 89 (11) :1065-1072
[6]   BUILDING PROTEINS WITH FIBRONECTIN TYPE-III MODULES [J].
CAMPBELL, ID ;
SPITZFADEN, C .
STRUCTURE, 1994, 2 (05) :333-337
[7]   Crystal structure of a tandem pair of fibronectin type III domains from the cytoplasmic tail of integrin α6β4 [J].
de Pereda, JM ;
Wiche, G ;
Liddington, RC .
EMBO JOURNAL, 1999, 18 (15) :4087-4095
[8]  
DeLano W.L., 2002, The PyMOL molecular graphics system
[9]   Coot:: model-building tools for molecular graphics [J].
Emsley, P ;
Cowtan, K .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 :2126-2132
[10]   A molecular map of the interactions between titin and myosin-binding protein C - Implications for sarcomeric assembly in familial hypertrophic cardiomyopathy [J].
Freiburg, A ;
Gautel, M .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1996, 235 (1-2) :317-323