Procedures for numerical analysis of circadian rhythms

被引:535
作者
Refinetti, Roberto
Cornelissen, Germaine
Halberg, Franz
机构
[1] Univ S Carolina, Circadian Rhythm Lab, Walterboro, SC 29488 USA
[2] Univ Minnesota, Chronobiol Ctr, Minneapolis, MN 55455 USA
基金
美国国家科学基金会;
关键词
biostatistics; circadian rhythm; chronobiology; chronomics; time series analysis;
D O I
10.1080/09291010600903692
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
This article reviews various procedures used in the analysis of circadian rhythms at the populational, organismal, cellular and molecular levels. The procedures range from visual inspection of time plots and actograms to several mathematical methods of time series analysis. Computational steps are described in some detail, and additional bibliographic resources and computer programs are listed.
引用
收藏
页码:275 / 325
页数:51
相关论文
共 209 条
[1]   Entrainment of the circatidal swimming activity rhythm in the cumacean Dimorphostylis asiatica (Crustacea) to 12.5-hour hydrostatic pressure cycles [J].
Akiyama, T .
ZOOLOGICAL SCIENCE, 2004, 21 (01) :29-38
[2]  
ALBERS HE, 1981, PHYSIOL BEHAV, V26, P21
[3]   On analyzing circadian rhythms data using nonlinear mixed models with harmonic terms [J].
Albert, PS ;
Hunsberger, S .
BIOMETRICS, 2005, 61 (04) :1115-1120
[4]   Modeling the body temperature throughout the day with a two-term function [J].
Almirall, H .
BEHAVIOR RESEARCH METHODS INSTRUMENTS & COMPUTERS, 1997, 29 (04) :595-599
[5]   Nonlinear estimation and statistical testing of periods in nonsinusoidal longitudinal time series with unequidistant observations [J].
Alonso, I ;
Fernández, JR .
CHRONOBIOLOGY INTERNATIONAL, 2001, 18 (02) :285-308
[6]   Rhythmic messenger ribonucleic acid expression of clock genes and adipocytokines in mouse visceral adipose tissue [J].
Ando, H ;
Yanagihara, H ;
Hayashi, Y ;
Obi, Y ;
Tsuruoka, S ;
Takamura, T ;
Kaneko, S ;
Fujimura, A .
ENDOCRINOLOGY, 2005, 146 (12) :5631-5636
[7]  
[Anonymous], 1996, Fast fourier transforms
[8]  
ARBOGAST B, 1983, CHRONOBIOLOGIA, V10, P59
[9]  
ASCHOFF J, 1979, Z TIERPSYCHOL, V49, P225
[10]  
BARNWELL FH, 1968, AM ZOOL, V8, P569