Production, purification and preliminary X-ray crystallographic studies of adeno-associated virus serotype 7

被引:16
作者
Quesada, Odayme [1 ]
Gurda, Brittney [1 ]
Govindasamy, Lakshmanan [1 ]
McKenna, Robert [1 ]
Kohlbrenner, Erik [2 ]
Aslanidi, George
Zolotukhin, Sergei [2 ]
Muzyczka, Nicholas [3 ]
Agbandje-McKenna, Mavis [1 ]
机构
[1] Univ Florida, McKnight Brain Inst, Ctr Struct Biol, Dept Biochem & Mol Biol, Gainesville, FL 32610 USA
[2] Univ Florida, Dept Pediat, Div Cell & Mol Theraphy, Gainesville, FL 32610 USA
[3] Univ Florida, Coll Med, Powell Gene Theraphy Ctr, Dept Mol Genet & Microbiol, Gainesville, FL 32610 USA
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2007年 / 63卷
关键词
D O I
10.1107/S1744309107060289
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Crystals of baculovirus-expressed adeno-associated virus serotype 7 capsids diffract X-rays to similar to 3.0 angstrom resolution. The crystals belong to the rhombohedral space group R3, with unit-cell parameters a = 252.4, c = 591.2 angstrom in the hexagonal setting. The diffraction data were processed and reduced to an overall completeness of 79.0% and an R-merge of 12.0%. There are three viral capsids in the unit cell. The icosahedral threefold axis is coincident with the crystallographic threefold axis, resulting in one third of a capsid (20 monomers) per crystallographic asymmetric unit. The orientation of the viral capsid has been determined by rotation-function searches and is positioned at (0, 0, 0) by packing considerations.
引用
收藏
页码:1073 / 1076
页数:4
相关论文
共 26 条
[1]  
[Anonymous], [No title captured]
[2]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[3]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[4]   Production, purification, crystallization and preliminary X-ray structural studies of adeno-associated virus serotype 5 [J].
DiMattia, M ;
Govindasamy, L ;
Levy, HC ;
Gurda-Whitaker, B ;
Kalina, A ;
Kohlbrenner, E ;
Chiorini, JA ;
McKenna, R ;
Muzyczka, N ;
Zolotukhin, S ;
Agbandje-Mckenna, M .
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2005, 61 :917-921
[5]   Coot:: model-building tools for molecular graphics [J].
Emsley, P ;
Cowtan, K .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 :2126-2132
[6]  
Gao GP, 2006, MOL THER, V13, P77, DOI 10.1016/j.ymthe.2005.08.017
[7]   Clades of Adeno-associated viruses are widely disseminated in human tissues [J].
Gao, GP ;
Vandenberghe, LH ;
Alvira, MR ;
Lu, Y ;
Calcedo, R ;
Zhou, XY ;
Wilson, JA .
JOURNAL OF VIROLOGY, 2004, 78 (12) :6381-6388
[8]   Novel adeno-associated viruses from rhesus monkeys as vectors for human gene therapy [J].
Gao, GP ;
Alvira, MR ;
Wang, LL ;
Calcedo, R ;
Johnston, J ;
Wilson, JM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (18) :11854-11859
[9]   Structurally mapping the diverse phenotype of adeno-associated virus serotype 4 [J].
Govindasamy, Lakshmanan ;
Padron, Eric ;
McKenna, Robert ;
Muzyczka, Nicholas ;
Kaludov, Nikola ;
Chiorini, John A. ;
Agbandje-McKenna, Mavis .
JOURNAL OF VIROLOGY, 2006, 80 (23) :11556-11570
[10]   IMPROVED METHODS FOR BUILDING PROTEIN MODELS IN ELECTRON-DENSITY MAPS AND THE LOCATION OF ERRORS IN THESE MODELS [J].
JONES, TA ;
ZOU, JY ;
COWAN, SW ;
KJELDGAARD, M .
ACTA CRYSTALLOGRAPHICA SECTION A, 1991, 47 :110-119