Strong, specific, reversible binding ligands for transfer RNA: Comparison by fluorescence and NMR spectroscopies with distamycin binding for a new structural class of ligand

被引:9
作者
Bichenkova, EV [1 ]
Sadat-Ebrahimi, SE [1 ]
Wilton, AN [1 ]
O'Toole, N [1 ]
Marks, DS [1 ]
Douglas, KT [1 ]
机构
[1] Univ Manchester, Sch Pharm & Pharmaceut Sci, Manchester M13 9PL, Lancs, England
来源
NUCLEOSIDES & NUCLEOTIDES | 1998年 / 17卷 / 9-11期
关键词
D O I
10.1080/07328319808004698
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Binding data are presented for the interaction with brewer's yeast tRNA(Phe) Of a new structural family of ligands, symmetrical 'bis-benzimidazoles. In addition specific perturbations in chemical shifts were detected by 1-dimensional NMR spectroscopy at 400 MHz for some imino and aromatic methyl protons of tRNA(Phe) when the tRNA was titrated with distamycin. Competitive displacement of the benzimidazole by added distamycin was followed fluorescence spectroscopy.
引用
收藏
页码:1651 / 1665
页数:15
相关论文
共 40 条
[1]   ORGANOTHALLIUM(III) REAGENTS FOR MODIFICATION OF BIOMACROMOLECULES - INTERACTION OF THALLIUM DERIVATIVES WITH TRANSFER-RNA [J].
BAINDUR, SR ;
DOUGLAS, KT .
BIOCHIMICA ET BIOPHYSICA ACTA, 1987, 923 (01) :66-73
[2]   ORGANOTHALLIUM(III) REAGENTS FOR SPECIFIC MODIFICATION OF TRANSFER-RNA FROM ESCHERICHIA-COLI [J].
BAINDUR, SR ;
DOUGLAS, KT .
JOURNAL OF THE CHEMICAL SOCIETY-CHEMICAL COMMUNICATIONS, 1985, (20) :1398-1399
[3]   STUDIES OF INTERACTIONS OF PORPHYRINS WITH TRANSFER-RNA BY HIGH-RESOLUTION NMR [J].
BIRDSALL, WJ ;
ANDERSON, WR ;
FOSTER, N .
BIOCHIMICA ET BIOPHYSICA ACTA, 1989, 1007 (02) :176-183
[4]  
Borisova O F, 1974, Mol Biol, V7, P411
[5]   PB(II)-CATALYSED CLEAVAGE OF THE SUGAR-PHOSPHATE BACKBONE OF YEAST TRANSFER RNAPHE - IMPLICATIONS FOR LEAD TOXICITY AND SELF-SPLICING RNA [J].
BROWN, RS ;
HINGERTY, BE ;
DEWAN, JC ;
KLUG, A .
NATURE, 1983, 303 (5917) :543-546
[6]   ARYLTHALLIUM(III) REAGENTS FOR PROTEIN MODIFICATION - INHIBITION OF LACTATE-DEHYDROGENASE FROM VARIOUS SOURCES BY ORTHO-CARBOXYPHENYLTHALLIUM(III) BISTRIFLUOROACETATE [J].
BUNNI, MA ;
DOUGLAS, KT .
BIOCHEMICAL JOURNAL, 1984, 217 (02) :383-390
[7]   ORGANOTHALLIUM(III) REAGENTS FOR MODIFICATION OF BIOMACROMOLECULES - IRREVERSIBLE LABELING OF PHOSPHOGLYCERATE KINASE FROM RABBIT MUSCLE [J].
BUNNI, MA ;
BAINDUR, SR ;
DOUGLAS, KT ;
DRAKE, AF .
BIOCHIMICA ET BIOPHYSICA ACTA, 1987, 923 (03) :421-430
[8]   SITE-SPECIFIC CLEAVAGE OF RNA BY FE(II).BLEOMYCIN [J].
CARTER, BJ ;
DEVROOM, E ;
LONG, EC ;
VANDERMAREL, GA ;
VANBOOM, JH ;
HECHT, SM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1990, 87 (23) :9373-9377
[9]   Efficient modification of RNA by porphyrin cation photochemistry: Monitoring the folding of coaxially stacked RNA helices in tRNA(Phe) and the human immunodeficiency virus type 1 Rev response element RNA [J].
Celander, DW ;
Nussbaum, JM .
BIOCHEMISTRY, 1996, 35 (37) :12061-12069
[10]   SHAPE-SELECTIVE CLEAVAGE OF TRANSFER RNAPHE BY TRANSITION-METAL COMPLEXES [J].
CHOW, CS ;
BARTON, JK .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1990, 112 (07) :2839-2841