Functional genomics of Arabidopsis photosynthesis

被引:17
作者
Pesaresi, P
Varotto, C
Richly, E
Kurth, J
Salamini, F
Leister, D
机构
[1] Max Planck Inst Zuchtungsforsch, ZIGIA, D-50829 Cologne, Germany
[2] Max Planck Inst Zuchtungsforsch, Abt Pflanzenzuchtung & Ertragsphysiol, D-50829 Cologne, Germany
关键词
Arabinopsis; functional genomics; mutant; photosynthesis; proteomics; reverse genetics; transcriptomics;
D O I
10.1016/S0981-9428(01)01238-4
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
The study of photosynthesis in higher plants will benefit significantly from the sequencing of the entire genome of Arabidopsis thaliana and from the recent development of new genomic technologies. For large sets of genes, it is now possible to identify their functions and levels of expression, and the post-translational modifications and interactions of their products. This functional genomic approach to photosynthesis is summarised here by considering the application of knock-out mutant screens (forward genetics), the identification of mutant alleles of genes whose sequence is known (reverse genetics), the use of microarrays to detect gene expression at genome level, the separation of proteins by two-dimensional electrophoresis, and their identification by mass spectrometry and bioinformatics. This emerging, integrated approach to the elucidation of gene function is presented and its potential is discussed. (C) 2001 Editions scientifiques et medicales Elsevier SAS.
引用
收藏
页码:285 / 294
页数:10
相关论文
共 66 条
[1]   A prediction of the size and evolutionary origin of the proteome of chloroplasts of Arabidopsis [J].
Abdallah, F ;
Salamini, F ;
Leister, D .
TRENDS IN PLANT SCIENCE, 2000, 5 (04) :141-142
[2]   Arabidopsis mutants lacking the 43-and 54-kilodalton subunits of the chloroplast signal recognition particle have distinct phenotypes [J].
Amin, P ;
Sy, DAC ;
Pilgrim, ML ;
Parry, DH ;
Nussaume, L ;
Hoffman, NE .
PLANT PHYSIOLOGY, 1999, 121 (01) :61-70
[3]   DETECTING MUTANTS THAT HAVE IMPAIRED PHOTOSYNTHESIS BY THEIR INCREASED LEVEL OF FLUORESCENCE [J].
BENNOUN, P ;
LEVINE, RP .
PLANT PHYSIOLOGY, 1967, 42 (09) :1284-&
[4]  
BENNOUN P, 1982, METHODS CHLOROPLAST, P25
[5]   ANALYSIS OF THE SLOW PHASES OF THE INVIVO CHLOROPHYLL FLUORESCENCE INDUCTION CURVE - CHANGES IN THE REDOX STATE OF PHOTOSYSTEM-II ELECTRON-ACCEPTORS AND FLUORESCENCE EMISSION FROM PHOTOSYSTEM-I AND PHOTOSYSTEM-II [J].
BRADBURY, M ;
BAKER, NR .
BIOCHIMICA ET BIOPHYSICA ACTA, 1981, 635 (03) :542-551
[6]   Exploring the new world of the genome with DNA microarrays [J].
Brown, PO ;
Botstein, D .
NATURE GENETICS, 1999, 21 (Suppl 1) :33-37
[7]   Mutations in the Arabidopsis gene immutans cause a variegated phenotype by inactivating a chloroplast terminal oxidase associated with phytoene desaturation [J].
Carol, P ;
Stevenson, D ;
Bisanz, C ;
Breitenbach, J ;
Sandmann, G ;
Mache, R ;
Coupland, G ;
Kuntz, M .
PLANT CELL, 1999, 11 (01) :57-68
[8]   Mutations in the Arabidopsis VAR2 locus cause leaf variegation due to the loss of a chloroplast FtsH protease [J].
Chen, M ;
Choi, YD ;
Voytas, DF ;
Rodermel, S .
PLANT JOURNAL, 2000, 22 (04) :303-313
[9]   The Arabidopsis thaliana HY1 locus, required for phytochrome-chromophore biosynthesis, encodes a protein related to heme oxygenases [J].
Davis, SJ ;
Kurepa, J ;
Vierstra, RD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (11) :6541-6546
[10]   Differential gene expression in Arabidopsis monitored using cDNA arrays [J].
Desprez, T ;
Amselem, J ;
Caboche, M ;
Höfte, H .
PLANT JOURNAL, 1998, 14 (05) :643-652