Preliminary crystallographic analysis of the major capsid protein P2 of the lipid-containing bacteriophage PM2

被引:8
作者
Abrescia, NGA
Kivelä, HM
Grimes, JM
Bamford, JKH
Bamford, DH
Stuart, DI
机构
[1] Univ Oxford, Wellcome Trust Ctr Human Genet, Div Struct Biol, Oxford OX3 7BN, England
[2] Univ Helsinki, Inst Biotechnol, Helsinki 00014, Finland
[3] Univ Helsinki, Dept Biol & Environm Sci, Helsinki 00014, Finland
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2005年 / 61卷
关键词
D O I
10.1107/S174430910502141X
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
PM2 (Corticoviridae) is a dsDNA bacteriophage which contains a lipid membrane beneath its icosahedral capsid. In this respect it resembles bacteriophage PRD1 (Tectiviridae), although it is not known whether the similarity extends to the detailed molecular architecture of the virus, for instance the fold of the major coat protein P2. Structural analysis of PM2 has been initiated and virus-derived P2 has been crystallized by sitting-nanodrop vapour diffusion. Crystals of P2 have been obtained in space group P2(1)2(1)2, with two trimers in the asymmetric unit and unit-cell parameters a = 171.1, b = 78.7, c = 130.1 angstrom. The crystals diffract to 4 A resolution at the ESRF BM14 beamline (Grenoble, France) and the orientation of the non-crystallographic threefold axes, the spatial relationship between the two trimers and the packing of the trimers within the unit cell have been determined. The trimers form tightly packed layers consistent with the crystal morphology, possibly recapitulating aspects of the arrangement of subunits in the virus.
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页码:762 / 765
页数:4
相关论文
共 22 条
[1]   Insights into assembly from structural analysis of bacteriophage PRD1 [J].
Abrescia, NGA ;
Cockburn, JJB ;
Grimes, JM ;
Sutton, GC ;
Diprose, JM ;
Butcher, SJ ;
Fuller, SD ;
Martín, CS ;
Burnett, RM ;
Stuart, DI ;
Bamford, DH ;
Bamford, JKH .
NATURE, 2004, 432 (7013) :68-74
[2]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[3]   Do viruses form lineages across different domains of life? [J].
Bamford, DH .
RESEARCH IN MICROBIOLOGY, 2003, 154 (04) :231-236
[4]   Evolution of viral structure [J].
Bamford, DH ;
Burnett, RM ;
Stuart, DI .
THEORETICAL POPULATION BIOLOGY, 2002, 61 (04) :461-470
[5]   Crystal structure of the top domain of African horse sickness virus VP7: Comparisons with bluetongue virus VP7 [J].
Basak, AK ;
Gouet, P ;
Grimes, J ;
Roy, P ;
Stuart, D .
JOURNAL OF VIROLOGY, 1996, 70 (06) :3797-3806
[6]   Does common architecture reveal a viral lineage spanning all three domains of life? [J].
Benson, SD ;
Bamford, JKH ;
Bamford, DH ;
Burnett, RM .
MOLECULAR CELL, 2004, 16 (05) :673-685
[7]  
BRUNER AT, 1992, XPLOR VERSION 3 1 SY
[8]  
Brunger AT, 1998, ACTA CRYSTALLOGR D, V54, P905, DOI 10.1107/s0907444998003254
[9]  
BUCHENOSMOND C, 2003, ICTVDB UNIVERSAL VIR
[10]   Membrane structure and interactions with protein and DNA in bacteriophage PRD1 [J].
Cockburn, JJB ;
Abrescia, NGA ;
Grimes, JM ;
Sutton, GC ;
Diprose, JM ;
Benevides, JM ;
Thomas, GJ ;
Bamford, JKH ;
Bamford, DH ;
Stuart, DI .
NATURE, 2004, 432 (7013) :122-125