Cross-correlated spin relaxation effects in methyl 1H CPMG-based relaxation dispersion experiments:: Complications and a simple solution

被引:13
作者
Korzhnev, DM
Mittermaier, AK
Kay, LE [1 ]
机构
[1] Univ Toronto, Prot Engn Network Ctr Excellence, Toronto, ON M5S 1A8, Canada
[2] Univ Toronto, Dept Med Genet, Toronto, ON M5S 1A8, Canada
[3] Univ Toronto, Dept Biochem & Chem, Toronto, ON M5S 1A8, Canada
基金
加拿大自然科学与工程研究理事会; 加拿大健康研究院;
关键词
cross-correlated spin relaxation; methyl groups; H-1 CPMG relaxation dispersion; H-1-C-13 multiple quantum coherence;
D O I
10.1007/s10858-005-2468-7
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Artifacts associated with the measurement of methyl H-1 single quantum CPMG-based relaxation dispersion profiles are described. These artifacts arise due to the combination of cross-correlated spin relaxation effects involving intra-methyl H-1-H-1 dipolar interactions and imperfections in H-1 refocusing pulses that are applied during CPMG intervals that quantify the effects of chemical exchange on measured transverse relaxation rates. As a result substantial errors in extracted exchange parameters can be obtained. A simple 'work-around' is presented where the H-1 chemical shift difference between the exchanging states is extracted from a combination of C-13 single quantum and C-13-H-1 multiple quantum dispersion profiles. The approach is demonstrated with an application to a folding/unfolding reaction involving a G48M mutant Fyn SH3 domain.
引用
收藏
页码:337 / 342
页数:6
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