共 91 条
Insights into host responses against pathogens from transcriptional profiling
被引:437
作者:

Jenner, RG
论文数: 0 引用数: 0
h-index: 0
机构: Whitehead Inst Biomed Res, Cambridge, MA 02142 USA

Young, RA
论文数: 0 引用数: 0
h-index: 0
机构: Whitehead Inst Biomed Res, Cambridge, MA 02142 USA
机构:
[1] Whitehead Inst Biomed Res, Cambridge, MA 02142 USA
[2] MIT, Dept Biol, Cambridge, MA 02139 USA
[3] MIT, Broad Inst, Cambridge, MA 02139 USA
[4] Harvard Univ, Cambridge, MA 02139 USA
关键词:
D O I:
10.1038/nrmicro1126
中图分类号:
Q93 [微生物学];
学科分类号:
071005 ;
100705 ;
摘要:
DNA microarrays have allowed us to monitor the effects of pathogens on host-cell gene expression programmes in great depth and on a broad scale. The comparison of results that have been generated by these studies is complex, and such a comparison has not previously been attempted in a systematic manner. In this review, we have collated and compared published transcriptional-profiling data from 32 studies that involved 77 different host-pathogen interactions, and have defined a common host-transcriptional-response. We outline gene expression patterns in the context of Toll-like receptor and pathogen-mediated signalling pathways, and summarize the contributions that transcriptional-profiling studies have made to our understanding of the infectious disease process.
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页码:281 / 294
页数:14
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共 91 条
- [1] The transcriptional responses of respiratory epithelial cells to Bordetella pertussis reveal host defensive and pathogen counter-defensive strategies[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (25) : 13847 - 13852Belcher, CE论文数: 0 引用数: 0 h-index: 0机构: Vet Affairs, Palo Alto Hlth Care Syst 154T, Palo Alto, CA 94304 USADrenkow, J论文数: 0 引用数: 0 h-index: 0机构: Vet Affairs, Palo Alto Hlth Care Syst 154T, Palo Alto, CA 94304 USAKehoe, B论文数: 0 引用数: 0 h-index: 0机构: Vet Affairs, Palo Alto Hlth Care Syst 154T, Palo Alto, CA 94304 USAGingeras, TR论文数: 0 引用数: 0 h-index: 0机构: Vet Affairs, Palo Alto Hlth Care Syst 154T, Palo Alto, CA 94304 USAMcNamara, N论文数: 0 引用数: 0 h-index: 0机构: Vet Affairs, Palo Alto Hlth Care Syst 154T, Palo Alto, CA 94304 USALemjabbar, H论文数: 0 引用数: 0 h-index: 0机构: Vet Affairs, Palo Alto Hlth Care Syst 154T, Palo Alto, CA 94304 USABasbaum, C论文数: 0 引用数: 0 h-index: 0机构: Vet Affairs, Palo Alto Hlth Care Syst 154T, Palo Alto, CA 94304 USARelman, DA论文数: 0 引用数: 0 h-index: 0机构: Vet Affairs, Palo Alto Hlth Care Syst 154T, Palo Alto, CA 94304 USA
- [2] Inferences, questions and possibilities in toll-like receptor signalling[J]. NATURE, 2004, 430 (6996) : 257 - 263Beutler, B论文数: 0 引用数: 0 h-index: 0机构: Scripps Res Inst, Dept Immunol, La Jolla, CA 92037 USA Scripps Res Inst, Dept Immunol, La Jolla, CA 92037 USA
- [3] DNA microarray analysis of chimpanzee liver during acute resolving hepatitis C virus infection[J]. JOURNAL OF VIROLOGY, 2001, 75 (15) : 7059 - 7066Bigger, CB论文数: 0 引用数: 0 h-index: 0机构: SW Fdn Biomed Res, Dept Virol & Immunol, SW Reg Primate Res Ctr, San Antonio, TX 78227 USABrasky, KM论文数: 0 引用数: 0 h-index: 0机构: SW Fdn Biomed Res, Dept Virol & Immunol, SW Reg Primate Res Ctr, San Antonio, TX 78227 USALanford, RE论文数: 0 引用数: 0 h-index: 0机构: SW Fdn Biomed Res, Dept Virol & Immunol, SW Reg Primate Res Ctr, San Antonio, TX 78227 USA
- [4] Human cytomegalovirus elicits a coordinated cellular antiviral response via envelope glycoprotein B[J]. JOURNAL OF VIROLOGY, 2004, 78 (03) : 1202 - 1211Boehme, KW论文数: 0 引用数: 0 h-index: 0机构: Univ Wisconsin, Sch Med, McArdle Lab Canc Res, Madison, WI 53706 USA Univ Wisconsin, Sch Med, McArdle Lab Canc Res, Madison, WI 53706 USASingh, J论文数: 0 引用数: 0 h-index: 0机构: Univ Wisconsin, Sch Med, McArdle Lab Canc Res, Madison, WI 53706 USA Univ Wisconsin, Sch Med, McArdle Lab Canc Res, Madison, WI 53706 USAPerry, ST论文数: 0 引用数: 0 h-index: 0机构: Univ Wisconsin, Sch Med, McArdle Lab Canc Res, Madison, WI 53706 USA Univ Wisconsin, Sch Med, McArdle Lab Canc Res, Madison, WI 53706 USACompton, T论文数: 0 引用数: 0 h-index: 0机构: Univ Wisconsin, Sch Med, McArdle Lab Canc Res, Madison, WI 53706 USA Univ Wisconsin, Sch Med, McArdle Lab Canc Res, Madison, WI 53706 USA
- [5] Gene expression patterns of epithelial cells modulated by pathogenicity factors of Yersinia enterocolitica[J]. CELLULAR MICROBIOLOGY, 2004, 6 (02) : 129 - 141Bohn, E论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, GermanyMüller, S论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, GermanyLauber, J论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, GermanyGeffers, R论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, GermanySpeer, N论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, GermanySpieth, C论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, GermanyKrejci, J论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, GermanyManncke, B论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, GermanyBuer, J论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, GermanyZell, A论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, GermanyAutenrieth, IB论文数: 0 引用数: 0 h-index: 0机构: Univ Tubingen, Inst Med Mikrobiol, Tubingen, Germany Univ Tubingen, Inst Med Mikrobiol, Tubingen, Germany
- [6] Stereotyped and specific gene expression programs in human innate immune responses to bacteria[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (02) : 972 - 977Boldrick, JC论文数: 0 引用数: 0 h-index: 0机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USAAlizadeh, AA论文数: 0 引用数: 0 h-index: 0机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USADiehn, M论文数: 0 引用数: 0 h-index: 0机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USADudoit, S论文数: 0 引用数: 0 h-index: 0机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USALiu, CL论文数: 0 引用数: 0 h-index: 0机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USABelcher, CE论文数: 0 引用数: 0 h-index: 0机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USABotstein, D论文数: 0 引用数: 0 h-index: 0机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USAStaudt, LM论文数: 0 引用数: 0 h-index: 0机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USABrown, PO论文数: 0 引用数: 0 h-index: 0机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USARelman, DA论文数: 0 引用数: 0 h-index: 0机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USA Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USA
- [7] Human cytomegalovirus UL83-coded pp65 virion protein inhibits antiviral gene expression in infected cells[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (20) : 11439 - 11444Browne, EP论文数: 0 引用数: 0 h-index: 0机构: Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USA Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USAShenk, T论文数: 0 引用数: 0 h-index: 0机构: Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USA Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USA
- [8] Altered cellular mRNA levels in human cytomegalovirus-infected fibroblasts: Viral block to the accumulation of antiviral mRNAs[J]. JOURNAL OF VIROLOGY, 2001, 75 (24) : 12319 - 12330Browne, EP论文数: 0 引用数: 0 h-index: 0机构: Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USA Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USAWing, B论文数: 0 引用数: 0 h-index: 0机构: Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USA Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USAColeman, D论文数: 0 引用数: 0 h-index: 0机构: Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USA Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USAShenk, T论文数: 0 引用数: 0 h-index: 0机构: Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USA Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USA
- [9] The damage-response framework of microbial pathogenesis[J]. NATURE REVIEWS MICROBIOLOGY, 2003, 1 (01) : 17 - 24Casadevall, A论文数: 0 引用数: 0 h-index: 0机构: Albert Einstein Coll Med, Dept Med, Div Infect Dis, Bronx, NY 10461 USAPirofski, LA论文数: 0 引用数: 0 h-index: 0机构: Albert Einstein Coll Med, Dept Med, Div Infect Dis, Bronx, NY 10461 USA
- [10] Microarray analysis identifies interferon-inducible genes and Stat-1 as major transcriptional targets of human papillomavirus type 31[J]. JOURNAL OF VIROLOGY, 2000, 74 (09) : 4174 - 4182Chang, YJE论文数: 0 引用数: 0 h-index: 0机构: Northwestern Univ, Sch Med, Dept Immunol Microbiol, Chicago, IL 60611 USA Northwestern Univ, Sch Med, Dept Immunol Microbiol, Chicago, IL 60611 USALaimins, LA论文数: 0 引用数: 0 h-index: 0机构: Northwestern Univ, Sch Med, Dept Immunol Microbiol, Chicago, IL 60611 USA Northwestern Univ, Sch Med, Dept Immunol Microbiol, Chicago, IL 60611 USA