The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

被引：324

作者：

Pagani, Ioanna ^{[1
]}

Liolios, Konstantinos ^{[1
]}

Jansson, Jakob ^{[1
]}

Chen, I-Min A. ^{[2
]}

Smirnova, Tatyana ^{[3
]}

Nosrat, Bahador ^{[1
]}

Markowitz, Victor M. ^{[2
]}

Kyrpides, Nikos C. ^{[1
]}

机构：

[1] Joint Genome Inst, Dept Energy, Microbial Genom & Metagen Program, Walnut Creek, CA USA

[2] Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA

[3] Joint Genome Inst, Dept Energy, Genome Portals Grp, Walnut Creek, CA USA

来源：

NUCLEIC ACIDS RESEARCH | 2012年 / 40卷 / D1期

基金：

美国国家卫生研究院;

关键词：

MONITOR; SYSTEM;

D O I：

10.1093/nar/gkr1100

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The Genomes OnLine Database (GOLD, http://www.genomesonline.org/) is a comprehensive resource for centralized monitoring of genome andmetagenome projects worldwide. Both complete and ongoing projects, along with their associated metadata, can be accessed in GOLD through precomputed tables and a search page. As of September 2011, GOLD, now on version 4.0, contains information for 11 472 sequencing projects, of which 2907 have been completed and their sequence data has been deposited in a public repository. Out of these complete projects, 1918 are finished and 989 are permanent drafts. Moreover, GOLD contains information for 340 metagenome studies associated with 1927 metagenome samples. GOLD continues to expand, moving toward the goal of providing the most comprehensive repository of metadata information related to the projects and their organisms/environments in accordance with the Minimum Information about any (x) Sequence specification and beyond.

引用

页码：D571 / D579

页数：9

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