Controlled field experiments to study the effects of heightened atmospheric inputs of nitrogen (N) to forests typically demonstrate that most N enters nonextractable pools in soil, while some N is taken up by vegetation, and varying amounts are exported. In a few experimental manipulations of N inputs to forests, N-15 has been added as a tracer to more closely study the fates and redistributions of NH4- and NO3- at the ecosystem level. We developed TRACE, a biogeochemical process model based on previous models, to interpret ecosystem-level N-15 field data following applications of N-15-enriched NO3- or NH4+ at the Harvard Forest, Massachusetts, USA. We simulated the forms, masses, atom%, and timing of N-15 applications in ambient and chronically fertilized plots over two growing seasons in coniferous and deciduous forest stands. Incorporating principles of stable-isotope redistributions, such as mass balance and pool dilution, into the process model provided a strong means of comparing alternative model formulations against field data. TRACE explicitly illustrated the manner in which rates of gross N turnover in soils could be high enough to provide strong sinks for N-15 in ambient plots, while limited enough to allow much greater uptake of N-15 by vegetation in fertilized plots. Ectorganic horizons, including litter and humified matter, were key in retaining N-15 inputs. We found that fine root uptake and turnover could not account for the rapid movement of N-15 into soil pools; direct assimilation into soil pools was required for both NH4- and NO3- in both deciduous and coniferous forests. Such high rates of N assimilation could not be accounted for by microbial biomass production using detrital C as the substrate. These findings have far-ranging implications for understanding the reciprocal effects of N deposition on forest C budgets, and forest C cycling on ecosystem N retention.