Cell fates as high-dimensional attractor states of a complex gene regulatory network

被引:495
作者
Huang, S
Eichler, G
Bar-Yam, Y
Ingber, DE
机构
[1] Childrens Hosp, Dept Pathol, Vasc Biol Program, Boston, MA 02115 USA
[2] Childrens Hosp, Dept Surg, Vasc Biol Program, Boston, MA 02115 USA
[3] Harvard Univ, Sch Med, Boston, MA 02115 USA
[4] New England Complex Syst Inst, Cambridge, MA 02138 USA
关键词
D O I
10.1103/PhysRevLett.94.128701
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Cells in multicellular organisms switch between distinct cell fates, such as proliferation or differentiation into specialized cell types. Genome-wide gene regulatory networks govern this behavior. Theoretical studies of complex networks suggest that they can exhibit ordered (stable) dynamics, raising the possibility that cell fates may represent high-dimensional attractor states. We used gene expression profiling to show that trajectories of neutrophil differentiation converge to a common state from different directions of a 2773-dimensional gene expression state space, providing the first experimental evidence for a high-dimensional stable attractor that represents a distinct cellular phenotype.
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页数:4
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