The interplay between structure and function in intrinsically unstructured proteins

被引:564
作者
Tompa, P [1 ]
机构
[1] Hungarian Acad Sci, Biol Res Ctr, Inst Enzymol, H-1518 Budapest, Hungary
基金
英国惠康基金;
关键词
natively unfolded protein; intrinsically disordered protein; protein disorder in vivo; functional classification; residual structure;
D O I
10.1016/j.febslet.2005.03.072
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Intrinsically unstructured proteins (IUPs) are common in various proteomes and occupy a unique structural and functional niche in which function is directly linked to structural disorder. The evidence that these proteins exist without a well-defined folded structure in vitro is compelling, and justifies considering them a separate class within the protein world. In this paper, novel advances in the rapidly advancing field of IUPs are reviewed, with the major attention directed to the evidence of their unfolded character in vivo, the interplay of their residual structure and their various functional modes and the functional benefits their malleable structural state provides. Via all these details, it is demonstrated that in only a couple of years after its conception, the idea of protein disorder has already come of age and transformed our basic concepts of protein structure and function. (c) 2005 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:3346 / 3354
页数:9
相关论文
共 83 条
[1]   CONFORMATION AND AGGREGATION OF BOVINE BETA-CASEIN-A .1. MOLECULAR ASPECTS OF THERMAL AGGREGATION [J].
ANDREWS, AL ;
ATKINSON, D ;
EVANS, MTA ;
FINER, EG ;
GREEN, JP ;
PHILLIPS, MC ;
ROBERTSON, RN .
BIOPOLYMERS, 1979, 18 (05) :1105-1121
[2]  
[Anonymous], FOLD DES
[3]   Apoptosis inhibitory activity of cytoplasmic p21Cip1/WAF1 in monocytic differentiation [J].
Asada, M ;
Yamada, T ;
Ichijo, H ;
Delia, D ;
Miyazono, K ;
Fukumuro, K ;
Mizutani, S .
EMBO JOURNAL, 1999, 18 (05) :1223-1234
[4]   Functional consequences of preorganized helical structure in the intrinsically disordered cell-cycle inhibitor p27Kip1 [J].
Bienkiewicz, EA ;
Adkins, JN ;
Lumb, KJ .
BIOCHEMISTRY, 2002, 41 (03) :752-759
[5]   Conformation of the RNA polymerase IIC-terminal domain: Circular dichroism of long and short fragments [J].
Bienkiewicz, EA ;
Woody, AYM ;
Woody, RW .
JOURNAL OF MOLECULAR BIOLOGY, 2000, 297 (01) :119-133
[6]   New insight into the solution structures of wheat gluten proteins from Raman optical activity [J].
Blanch, EW ;
Kasarda, DD ;
Hecht, L ;
Nielsen, K ;
Barron, LD .
BIOCHEMISTRY, 2003, 42 (19) :5665-5673
[7]   Anatomy of hot spots in protein interfaces [J].
Bogan, AA ;
Thorn, KS .
JOURNAL OF MOLECULAR BIOLOGY, 1998, 280 (01) :1-9
[8]   Combining prediction, computation and experiment for the characterization of protein disorder [J].
Bracken, C ;
Iakoucheva, LM ;
Rorner, PR ;
Dunker, AK .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2004, 14 (05) :570-576
[9]   The regions of securin and cyclin B proteins recognized by the ubiquitination machinery are natively unfolded [J].
Cox, CJ ;
Dutta, K ;
Petri, ET ;
Hwang, WC ;
Lin, YQ ;
Pascal, SM ;
Basavappa, R .
FEBS LETTERS, 2002, 527 (1-3) :303-308
[10]   Primary contact sites in intrinsically unstructured proteins:: The case of calpastatin and microtubule-associated protein 2 [J].
Csizmók, V ;
Bokor, M ;
Bánki, P ;
Klement, T ;
Medzihradszky, KF ;
Friedrich, P ;
Tompa, K ;
Tompa, P .
BIOCHEMISTRY, 2005, 44 (10) :3955-3964