Efficient amplification of insert end sequences from bacterial artificial chromosome clones by thermal asymmetric interlaced PCR

被引:139
作者
Liu, YG
Huang, N
机构
[1] S China Agr Univ, Ctr Biotechnol, Guangzhou 510642, Peoples R China
[2] Int Rice Res Inst, Manila 1099, Philippines
关键词
bacterial artificial chromosome; chromosome walking; insert end sequences;
D O I
10.1023/A:1007420918645
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
TAIL-PCR is a powerful tool for the recovery of DNA fragments adjacent to known sequences. A protocol is presented for the amplification of insert end sequences from bacterial artificial chromosome clones using TAIL-PCR. The amplified products are suitable as probes for chromosome walking and genome mapping and as templates for direct sequencing. The protocol has been used in rice genome studies.
引用
收藏
页码:175 / 181
页数:7
相关论文
共 9 条
  • [1] DPC4, a candidate tumor suppressor gene at human chromosome 18q21.1
    Hahn, SA
    Schutte, M
    Hoque, ATMS
    Moskaluk, CA
    daCosta, LT
    Rozenblum, E
    Weinstein, CL
    Fischer, A
    Yeo, CJ
    Hruban, RH
    Kern, SE
    [J]. SCIENCE, 1996, 271 (5247) : 350 - 353
  • [2] EFFICIENT ISOLATION AND MAPPING OF ARABIDOPSIS-THALIANA T-DNA INSERT JUNCTIONS BY THERMAL ASYMMETRIC INTERLACED PCR
    LIU, YG
    MITSUKAWA, N
    OOSUMI, T
    WHITTIER, RF
    [J]. PLANT JOURNAL, 1995, 8 (03) : 457 - 463
  • [3] THERMAL ASYMMETRIC INTERLACED PCR - AUTOMATABLE AMPLIFICATION AND SEQUENCING OF INSERT END FRAGMENTS FROM P1 AND YAC CLONES FOR CHROMOSOME WALKING
    LIU, YG
    WHITTIER, RF
    [J]. GENOMICS, 1995, 25 (03) : 674 - 681
  • [4] RAPID SEQUENCING OF UNPURIFIED PCR PRODUCTS BY THERMAL ASYMMETRIC PCR CYCLE SEQUENCING USING UNLABELED SEQUENCING PRIMERS
    LIU, YG
    MITSUKAWA, N
    WHITTIER, RF
    [J]. NUCLEIC ACIDS RESEARCH, 1993, 21 (14) : 3333 - 3334
  • [5] High resolution mapping of the indica-derived rice blast resistance genes .1. Pi-b
    Miyamoto, M
    Ando, I
    Rybka, K
    Kodama, O
    Kawasaki, S
    [J]. MOLECULAR PLANT-MICROBE INTERACTIONS, 1996, 9 (01) : 6 - 13
  • [6] CLONING AND STABLE MAINTENANCE OF 300-KILOBASE-PAIR FRAGMENTS OF HUMAN DNA IN ESCHERICHIA-COLI USING AN F-FACTOR-BASED VECTOR
    SHIZUYA, H
    BIRREN, B
    KIM, UJ
    MANCINO, V
    SLEPAK, T
    TACHIIRI, Y
    SIMON, M
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (18) : 8794 - 8797
  • [7] Characterization and mapping of Ds-GUS-T-DNA lines for targeted insertional mutagenesis
    Smith, D
    Yanai, Y
    Liu, YG
    Ishiguro, S
    Okada, K
    Shibata, D
    Whittier, RF
    Fedoroff, NV
    [J]. PLANT JOURNAL, 1996, 10 (04) : 721 - 732
  • [8] A transposon insertion in the Arabidopsis SSR16 gene causes an embryo-defective lethal mutation
    Tsugeki, R
    Kochieva, EZ
    Fedoroff, NV
    [J]. PLANT JOURNAL, 1996, 10 (03) : 479 - 489
  • [9] Construction of a bacterial artificial chromosome (BAC) library and identification of overlapping BAC clones with chromosome 4-specific RFLP markers in rice
    Yang, D
    Parco, A
    Nandi, S
    Subudhi, P
    Zhu, Y
    Wang, G
    Huang, N
    [J]. THEORETICAL AND APPLIED GENETICS, 1997, 95 (07) : 1147 - 1154